Populus trichocarpa (black cottonwood): 7460829
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Entry
7460829 CDS
T01077
Name
(RefSeq) choline transporter protein 1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7460829
04147 Exosome [BR:
pop04147
]
7460829
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
7460829
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
7460829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Motif
Other DBs
NCBI-GeneID:
7460829
NCBI-ProteinID:
XP_002316905
LinkDB
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Position
11:15169652..15175896
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AA seq
697 aa
AA seq
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MRGPLGAVIGRYPSSDGSTQVGGIIRHNRKCRDVAFLVIFIAFWVAMVVNSSFGFNKGNP
LRLTYGLDYKGNVCGDRHAHPGLRELELTYWLNPNQVYLSGLKNSQFKLANARTICLLDC
PIPSEDALNWVCDYPEGEIRLSVDDWIDRNYDYFEFLTPEMRNTSLQLQGPCYPVIFPSV
NVYWRCQYVARASNVSMRHWQQMGGVNINEDIIIDKSIHRSINARSSVLKRYVADIEKSW
PVLIVCGGLLPLFVSVIWLLLIRHFVAAMPWITVALFNILIIAVTMFYYLKAGWIGNDAI
SPIIGAHDPYYHVFGRELNHLRAAAVLMTFIMVVSILTSIAIVHRILMATSVLKVAAKVI
GEVQALIIFPVMPYAILGIFYMFWFAAAFYLFSSGQIVQNNCNSNCCAYDLVSKRVNCDR
CCGYSIHYTPHISIAIFFHLFGCYWATQFFIACSSTVIAGSVASYYWARGETSPEIPFLP
VFSSMKQLIRYSLGSVALGSLVLSFVESVRFILESIRRKLKVANTTPESCMGRTAYHTSR
FCFQCIEWIIRSVNRNAYIMIAITGKSFCRASAIATELIISNILRIGRVNVIGDVILYLG
KLCVSLSSALFAFLMLDTHKYRSAHNKISSPLLPVLVCWALGYVVATLFFAVVEMSIDAI
ILSFCQDSEEHQGTAQYAPPLLMETLGDQNEMQRLTQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagaggacccttaggggcagtgatagggaggtacccttcaagtgatgggagtactcaa
gttggtggaatcattagacacaacaggaaatgtcgagatgttgcatttcttgttattttc
atagcattctgggttgctatggttgttaactctagctttggattcaacaaaggaaaccct
ttaaggcttacttatgggctggactacaaaggaaatgtttgtggtgacagacatgcacac
cctggtcttcgtgaattggagcttacatattggttaaatcctaaccaggtctatcttagt
ggtttgaagaacagccaattcaagttggctaatgctcggactatatgcttgttggactgt
cccattccctcagaagatgcacttaattgggtgtgtgattatccagaaggagaaatccgt
ctctctgtagatgattggattgataggaactatgactattttgagttcctcactcctgaa
atgagaaacacctctcttcaacttcagggtccctgttaccctgtgatattcccaagtgta
aatgtttattggagatgccaatatgttgctcgtgcatcaaatgtatctatgcgacattgg
cagcaaatgggtggagtgaacatcaatgaggacattataatagacaaatccattcacagg
tccatcaatgctcggtcatcagttttgaagagatacgtggctgacattgaaaagtcctgg
ccagtattgattgtttgtggaggactcttgccactatttgtatcagtgatctggctactg
ctgattcggcattttgttgctgcaatgccttggataacagttgccctttttaatattctc
attattgcagtaacaatgttttactaccttaaagctggatggattgggaatgatgcgatc
tcccctatcattggtgcacatgatccgtactaccacgtgtttggacgggagctaaatcat
ctccgcgctgctgctgttctgatgacttttataatggttgtttccatccttacatcaatt
gccatagtccaccgaatccttatggctacatctgtcctcaaggttgctgcaaaggtcata
ggagaagttcaagcactcataatctttccagtgatgccatatgctatccttggaatcttt
tatatgttctggtttgcagctgcattctatttgtttagttccggccagattgtccagaac
aattgcaactccaattgctgtgcatatgatcttgtatcaaaaagggtcaactgtgatcgt
tgctgtggttatagcatccattatactccccacatatcaattgcaatttttttccaccta
tttggttgttactgggccacccaattctttatagcttgctcttcaactgtgattgcgggt
tccgttgcctcctattattgggctcgtggtgagacatcgccagagattccattcctacct
gttttttcctctatgaagcagcttatacggtacagccttggttctgtggctcttggctcc
ttggtgttgtcgtttgtggaatctgttcgcttcatacttgagtcaattcgtcgcaaactg
aaagttgctaatactactcctgaaagctgtatgggaaggacagcatatcacacttctcgg
ttttgttttcaatgtattgagtggattataagatctgtgaaccgcaatgcttatataatg
atagctataacaggtaaaagcttctgcagagcttctgcaattgcaactgaattgatcatc
agcaacatccttagaatagggagggtgaatgtgattggagatgtcattctatatcttgga
aagttatgtgtcagcctctcaagtgcactttttgctttcctgatgttggatacccacaaa
tatagatcagctcataacaagatttcctccccactgcttcctgtgctggtctgctgggct
ctcggttacgttgttgcaactctcttctttgctgtggtggagatgtcaattgatgctatc
attctttcattctgtcaggattcggaggagcaccaggggacagcacaatatgctcctcct
cttctgatggagacactgggtgatcaaaatgagatgcagagacttactcaatga
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