Populus trichocarpa (black cottonwood): 7460847
Help
Entry
7460847 CDS
T01077
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7460847
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
7460847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
bL31_N
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
7460847
NCBI-ProteinID:
XP_002316923
LinkDB
All DBs
Position
11:15430158..15442315
Genome browser
AA seq
1258 aa
AA seq
DB search
MANYLAQFQTIKNSCDHIVIAVEDVSDLWPNIKSGFDERVPIKRASLNNKTRNPVLVENF
PCEFILTTDSRLRSRFPQEQSLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEK
EWFIVFVSRAHPSNDNAVKMAKKVYAKLEVDFSSKKRERCCKYDIHGPEAIFWDDLESKI
MECVRNTLDRRVQFYEDEIRKLTEQRFMPVWNFCNFFILKESLAFMFEMAHLYEDALREY
DELELCYLETVNMPGKQREFGGVDHGDDWAALLNPENKPLTQIVQDDSFREFEFRQYLFA
YQSKLLFKLNRPFEVASRGHSFIIGFSKALTLHENMLPFCMREVWVITACLAIINATAPN
YDGLVAPDIEKEFYRLKGDLYSLCRVKFMRLAYLIGYGADIERSPVNSALLSMLPWPKPL
VWPSVPPDASPEVLEKEKVILQATPKIKHFGIQRKPLPLEPSVLLREANRRRASLSAGNV
FEMFDGRPTLIDGSASDASSRTPLLKKMNAISMSRTNSSPGTFDGSVDRPMRLAEIYVAA
EHALKHTISDADLWKALSSVEEFEQKYLELTKGAADNYHHSWWKRHGVVLDGEIAAVCFG
HGNFDLAAKSYEKVCALYAGEGWQELLADVLPNLAECQKMLNDQAGYLASCVRLLSLDKG
LFSTKERQAFQAEVLRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDGDPGILSVTVWS
GFPDDITLDSLNLTLTATFNADEGAKALRSSTATILKPGRNTITLALPPQKPGSYVLGVL
TGQIGQLRFRSHSFSKVGPADSDDFMSYEKPTRPILKVFKPRPLVDLAAAISSALLINET
QWVGVIVRPIDYSLKGAVLYIDTGPGLNIEESHVIEMETRVNISQSSAEMTNSNGTQKDC
SSASKKEFQQLKLQDGRIEFPAWASDVNSVLWIPVRAISDRLPRGSSSVTPQKQSNLDGM
RTIALKLEFGVSHNQIFERTVAVHFTDPFHVSTRVADKCNDGTLLLQVILHSQVKATLTI
YDAWLELQDGFIHTGQGTGRPTSSFFPLMISPTSRAGIMFSIRLGKVIDKDEVEALQTES
ILNIRYGIYGERTNGAHPPVSVDGIEPEDARQDLLFKSAIVLQRPVLDPCLAVGFLPLPS
TGLRVGQLITMQWRVERLKGLEDNGISEHNGEVLYEVSANSENWMLAGRKRGHVTLSTIQ
GSRIVISVLCVPLVAGYVRPPQLGLPDVDESNISCNPPGPHLVCVMPPALSSSFCIPP
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactacctcgctcaatttcaaactatcaaaaatagctgcgatcacatcgtcatt
gcagttgaagatgtgagtgatttatggccgaacataaaatcaggattcgatgagagagtt
ccaattaaaagagctagtttaaataacaagactcgaaatccagttctcgtagagaatttt
ccttgcgaatttatattaactactgattcaagactccgcagccggtttcctcaagaacag
tctttgttttggtttcgcgaaccgtacgctactattgttctagtcacttgtgaggatctt
gatgagtttaaaacgatacttaagccgcggttgaagttaattgtgcaaaatgacgagaag
gaatggtttattgtgtttgtgtcgagagcgcatccgagtaatgataatgctgttaaaatg
gcgaaaaaggtttatgctaagcttgaagttgatttcagctcgaaaaaaagggagaggtgc
tgcaaatatgatattcatggccctgaagcaattttttgggatgatttagaatcgaaaatt
atggagtgtgtcagaaacacactggataggcgtgtacagttttatgaggatgagatacgt
aagctcactgaacagcggttcatgccagtctggaatttctgtaatttctttatattgaag
gaaagcttggcttttatgtttgagatggctcatctttatgaagatgctctacgtgaatat
gatgaattggaactctgttatttggaaacagttaatatgcctggaaaacagagagaattt
ggaggagtagaccatggtgatgattgggcagcactgcttaatcctgaaaataagccattg
acgcagattgttcaagatgattcatttagagaatttgaatttaggcagtatctctttgct
taccaatcaaagcttttattcaagctgaatcgtccctttgaggttgcatcaaggggtcat
tcatttataattggcttctcaaaggccctcacattgcatgagaatatgctacctttttgt
atgcgagaagtttgggtaataactgcttgcttggctataatcaatgctactgctcctaat
tacgatggacttgtggcacctgacatagaaaaggagttctaccgcctcaagggtgatctt
tattctttatgtcgagttaagttcatgaggctggcctatttgatcggatatggagcagat
atagaaagaagtcctgtcaacagtgccttactcagcatgctaccttggcccaagcctctg
gtttggccatcggttccacctgatgcttcccctgaggttcttgagaaggaaaaggtgatc
cttcaagctactcctaaaatcaaacactttggcatccagaggaagccactgcctcttgaa
ccttctgtacttctgcgagaggctaatcggcgaagggcttccctttctgctgggaatgtg
tttgagatgtttgatggccgcccaaccttgattgatggatcagcttcagatgcttcatca
aggacccccctattaaagaaaatgaatgcgatttctatgtcgcggactaattcttcaccc
ggaacttttgatggttcagtagatcgacctatgagacttgcagagatttatgttgctgcc
gaacatgctctgaagcatacaatttctgatgcagatctttggaaagctttgtcatctgta
gaggagtttgagcaaaagtatctcgagctaaccaaaggtgctgctgacaattaccatcat
tcctggtggaaaaggcatggagttgttctcgatggtgaaatagcagctgtttgctttggg
catggaaattttgatctagctgcaaagtcttatgagaaagtttgtgccctttatgctggc
gaaggatggcaggaattattggctgatgtccttcccaatttagctgagtgccagaagatg
ctaaatgatcaagctggctatttagcatcttgcgtgagattgctgtctttagataaaggt
ttattctcaacaaaggagcgccaagcatttcaggccgaggttcttcgtcttgcacacagt
gagatgaaggaccctgtgcccttggatgtttcatcactgattacgttttctggaaatcct
ggacctcccttggagttatgtgatggggatcctggtattctctctgtaactgtttggagt
ggctttcctgatgatataactcttgattcacttaacctcactttgactgctacatttaat
gctgacgagggtgctaaggcattaaggagctctactgccaccatactgaagcctggtagg
aataccattacccttgctttacctcctcaaaaaccaggttcctatgtcttgggggttctt
actgggcagattggtcagttgagatttagatctcatagtttttcaaaggttggcccagcg
gacagtgatgatttcatgagttatgaaaaacccactagacctatactcaaggttttcaaa
ccaagaccactagttgatcttgctgcagctatttcatctgctttactgataaatgaaact
cagtgggttggggttatagtacggcctattgactactctctcaaaggtgctgtcttgtat
attgatactggtccaggtctgaatattgaagagtcgcatgtcattgagatggagacccgt
gtcaatatatcacagagcagtgctgaaatgacaaactctaatggcacacaaaaggattgt
tcttcagcttctaaaaaagaatttcagcagttaaaacttcaagatggtagaatagagttt
cctgcttgggcaagtgatgtaaattctgttctctggattcctgttcgtgcaatcagtgac
aggcttcctagagggtcatcctcagtcacccctcagaaacaaagcaatctagatggcatg
aggacaattgctttgaaacttgaatttggagtatcccacaaccagatatttgaaagaact
gtagcagtacatttcactgatcctttccatgtgagcacacgtgttgcagacaagtgtaat
gatggtactctgctgttgcaggtgatactgcattcccaagtgaaggctacgttgaccata
tatgatgcttggcttgagcttcaagatggatttattcatactggacaaggaactggaaga
ccaacttcaagcttcttcccgctcatgatttctccaacctctagagcaggaatcatgttc
agtattcgcttgggaaaagtaattgacaaagatgaagtggaagcactgcagacagagagc
atactaaatatccgatatggaatttatggtgagcgaacaaacggagcacatcctcctgtt
tccgtggatggcattgaacctgaggatgccaggcaggacttgctattcaagagtgctatt
gtactgcagagaccagtgcttgacccatgcctggctgttggttttcttcctcttccttca
actggcctcagagttggacaactcatcaccatgcagtggagagttgaaagattgaagggc
ctggaggacaatggaatttctgaacacaatggtgaggtgctgtatgaagtcagtgcaaat
tctgaaaattggatgcttgctgggagaaagcgcggacatgttactctctcaacaatccaa
ggttcaagaatagtcatctcagtattatgtgtgccgttggtagctggttatgtccgccct
cctcaacttgggctaccagatgttgatgagtcaaatataagctgcaatcctcctgggccc
catctggtttgtgtcatgcctccagctctcagctcctccttctgcattccgccttga
DBGET
integrated database retrieval system
