Populus trichocarpa (black cottonwood): 7460857
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Entry
7460857 CDS
T01077
Name
(RefSeq) myosin-2
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7460857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7460857
04131 Membrane trafficking [BR:
pop04131
]
7460857
03029 Mitochondrial biogenesis [BR:
pop03029
]
7460857
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7460857
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7460857
mRNA cycle factors
P-body specific factors
7460857
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7460857
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7460857
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7460857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
SH3_VIII-1_N
IQ
nSTAND3
Zeta_toxin
AAA_22
NPHP3_N
AAA_16
Beta-prop_CGLA
Motif
Other DBs
NCBI-GeneID:
7460857
NCBI-ProteinID:
XP_024467530
LinkDB
All DBs
Position
11:15652889..15666761
Genome browser
AA seq
1196 aa
AA seq
DB search
MMLSASPAAVTRSSLEEMLDSLRRRDEGLEKSKDLPPALPARPTSRARLPSARHSLPTDF
KVGSNGQVESKVETRVSKVKGDTKRKGKELGYKSGNFGSKKMRKDQNCVDSNPYVEENNE
KVNGLVAGSVPRGKEPEWDDNIGYFIKKRLRVWCRLPNGQWGLGKIQETFGDEATISLLS
GTVVKVSTAELLPANPDILEGVDDLIQLSYLNEPSVLHNIKHRYAQDLIYSKAGPVLIAV
NPFKEIPIYGNEILTSYKQKAKDSPHVYAIADAAYNEMMRDEKNQSIIISGESGAGKTET
AKYAMQYLAALGCGNDGMEYRILQTNCILQAFGNAKTSRNNNSSRFGKLIEIHFTTSGKI
RGAKIQTFLLEKSRVVQLANDERSYHIFYQLCAGAPSTLRDRLNLRMASEYKYLNQSECL
VVDGVDDGMEFHKLVDALDIVQICKDDQEQAFAMLAAVLWLGNISFQVIDNGNHVEVLAN
EAVENAARLINCSAQDLVLALSTHKIQAGKDFIAKKLTMQKAIDRRDALAKFIYARLFEW
LVVQINKSVEMGELSTGRSISILDVYGFESFKNNSFEQFCINYANERLQQHFNRHLFKLE
QEEYEEDGINWTKVDFEDNQECLNLFEKKPLGLLSVLDEESNIPNATDLTFANKLKQYFN
DNPCFKGERGRAFGVCHYAGEVVYDTNGFLEKNRDPMHSDFIHLLSSSGCQLPKSASLSC
QSGGLESSMQSVGTKFKSQLFKLMHQLEKTTPHFIRCIKPNAKQFPDQYEDDLVSQQLRC
CGVLEVVRISRYGYPTRMTHQEFAGRYGFLLMETNVSWDPLSMSVAILKKFNFLPEMYEV
GYTKVYLRMGQIGRLEEQRKQFLLGIVEVQKYFRGGQARRHFHELKQGVVILQSFIRGEN
MRRKYNHMIKRRTANAPLAVDDQLVAALYLQSVIRGWLARKQFNSMHKMKQLTHENSNSK
RKPGKKISEVKVIPQEQVDIQTSILAELQKRVVKAEVTVAQKEEENAALKDQLQQNEKRW
LDYEAKMKAMEEMWQVQMASLQTSLAAARKSLAADNTAGQPGKLDSSTSPHYYDSEDYVS
TESRTPGGNTPNIFANTFPDLRAVRENNGPVHAVSNLTKEFEQQKQNFDDNVKALVEVRA
GQSASNMNPDEELRRLKLGFETWKKDYKVRLRETKARLHKLGHGEVDRNRRKWWRR
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgatgttatcagcgtcacccgcggcggtgacaaggagttctctggaggagatgctggac
tcactgcggcgacgagatgagggtttggagaagtccaaggacctgccacccgctttgcca
gcacgtcctacttctagggcaaggcttccctcggctcgccactcactgcctacagacttt
aaagtcggttctaatggacaagtggagagcaaagtggagacaagagttagtaaagtgaag
ggggatacaaaaagaaaggggaaggagttggggtacaaatcagggaatttcggaagcaag
aaaatgaggaaagatcaaaattgtgtggattctaatccatatgtagaagagaataatgag
aaagtgaatgggcttgttgcgggttcagtaccaaggggaaaagaaccagagtgggatgat
aatatcggttattttatcaagaagagactccgtgtttggtgtcgtctcccaaatgggcag
tgggggttaggaaagatacaggaaactttcggggacgaagcaaccatttcacttttatca
ggaactgttgtcaaagtgtctacagcagagctcttacctgcaaaccctgatatccttgag
ggcgtggatgatcttatacagcttagttatttaaatgaaccttctgtgcttcataatatt
aagcacagatatgctcaggatctgatttatagtaaagcaggtccagttttgattgctgtc
aatccctttaaagaaattccgatttatggaaatgaaattctcacttcttacaagcagaag
gctaaggatagccctcatgtttatgctatagcagatgctgcttataatgagatgatgaga
gatgaaaagaaccagtccataatcataagtggtgaaagtggagctgggaaaactgagaca
gccaagtatgctatgcagtacttggctgctcttggttgtggcaatgacggtatggagtat
agaatccttcaaactaattgtatacttcaagcatttgggaatgcaaaaacatccaggaat
aacaactccagtagatttggaaagttgattgaaattcattttaccacatcaggaaagatt
cgtggtgctaaaatccaaacttttctactagaaaagtcaagagtagttcagcttgccaat
gatgaaagatcataccatatcttctatcaactttgtgctggtgctccttcgactcttaga
gatagactgaaccttagaatggctagcgagtacaagtatcttaaccagagtgagtgcttg
gtagttgatggtgttgatgatggcatggagtttcataagctcgtggatgccttggacata
gttcaaatttgcaaagatgatcaagagcaggcatttgcaatgcttgctgcagtattatgg
cttggaaacatatcgtttcaagtaattgacaatggaaatcatgtagaggttctcgctaat
gaagctgtagaaaatgctgccaggctaataaattgcagtgcccaggacctggtgttagct
ctatcaacccataaaatccaagctggaaaggattttattgctaaaaaattgacaatgcaa
aaggctattgatagaagagatgcattggcaaagtttatctatgccaggttgtttgagtgg
cttgtggtacaaataaacaagtcagttgaaatgggtgagctgagtactgggagatccata
agtatccttgatgtctatggttttgagtcatttaagaataatagcttcgagcaattctgc
ataaattatgcgaatgagaggctgcaacaacatttcaaccggcatctatttaaacttgag
caggaagagtatgaagaggatgggattaattggactaaagttgattttgaagataaccaa
gagtgcttgaatctctttgagaagaaacctttagggttgctatctgtattggatgaggaa
tcaaatatccctaatgccactgatttgaccttcgccaataagcttaagcaatacttcaat
gataatccttgctttaaaggtgaaagagggagggcttttggtgtttgtcattatgctgga
gaggttgtatatgataccaatggctttctggaaaagaaccgtgatccaatgcactctgat
ttcatccatctgctatcatcaagtggttgccaattaccaaaatcagctagtctatcctgt
caatctggtggattggaatcctcaatgcaaagtgttggtacgaagttcaagagtcaactc
ttcaaactaatgcaccagttggagaaaacaactcctcacttcatccgctgcataaaacca
aatgctaagcagtttccagaccagtatgaagatgatcttgtctcccagcaactacgatgt
tgtggtgttttggaagttgtgaggatttcaagatatggatatcctactcgaatgacacat
caagaatttgcgggaaggtatggtttcctgcttatggagacaaatgtatcttgggatcca
ctaagcatgtcagttgctattctcaaaaaatttaatttcctccctgaaatgtatgaagtt
ggttacaccaaagtgtacctgcgaatgggccagattgggagattggaagagcagagaaaa
caatttctgctaggtattgttgaggttcaaaagtatttccgtggtggccaggcccgtcga
catttccatgaactcaaacaaggagtggtgatattacaatcattcatccgtggtgaaaac
atgagaaggaaatacaatcacatgataaagaggcgcacagctaatgctcctctagcagtt
gatgatcagctagtggcagctttatatttacaatctgtaatccgtgggtggttggctcga
aagcagttcaacagtatgcataaaatgaagcagttaactcatgagaattcaaattccaaa
agaaaaccgggcaagaagatttcagaagtgaaggtcataccacaagagcaggttgacatt
cagacttcaattttagctgagctccaaaaaagggttgttaaagcagaagtaacagttgca
caaaaggaggaggaaaatgctgcactgaaagatcaattgcaacagaacgagaaaagatgg
ttggattatgaggcaaagatgaaagcaatggaagagatgtggcaagtgcaaatggcatca
ttgcaaacgagtcttgctgcagccagaaagagtcttgcagctgacaacactgcaggccaa
cctggaaaactggattcttctacatcacctcactattatgattctgaagattatgtttct
acggaatctcgaactcctggtgggaacactcccaacatatttgcgaataccttccctgat
ttaagagcagtgagagagaataatggtcctgtgcatgcagtcagcaatcttacaaaggaa
tttgagcagcagaaacaaaattttgacgacaatgtcaaagcattagttgaggtaagggct
ggacaatcagcttctaacatgaatccggatgaagagcttcgaagattgaaactagggttt
gagacatggaagaaagactataaggttagattacgggagacaaaggcaaggcttcacaaa
cttgggcatggagaagttgatagaaatcgtcggaagtggtggaggagatag
DBGET
integrated database retrieval system
