Populus trichocarpa (black cottonwood): 7460932
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Entry
7460932 CDS
T01077
Name
(RefSeq) oxysterol-binding protein-related protein 1C isoform X1
KO
K20456
oxysterol-binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7460932
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
7460932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
7460932
NCBI-ProteinID:
XP_002307417
UniProt:
B9H7A6
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All DBs
Position
5:complement(17839784..17850393)
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AA seq
815 aa
AA seq
DB search
MHPLCCISTVSDHSPANLSMAVTVRSNPDPGSTTVQPQNQNQNHNNTSHFSNHHHHNHST
ASYCSSNNGTDCNKNNRMSHQRVSSAREQPLIQVDVKINDIVGNGISGILYKWVNYGKGW
RPRWFVLQDGVLSYYKIHGPDKILVNQETEKGSKIIGEESMRRISRPKNGNSQNRRKPVG
EIHLKVSSIRESRSDDKRFSIFTGTKRLHLRAETREDRLAWMEALQAVKDMFPRMSNSEL
MGPLDSVAVSTEKLRQRLQEEGVREELILDSEQIMRSEFAALQNQIVLLKQKQWLLIDTL
RHLETEKVDLENTVVDESRRQLNDQGTTSSSILRQYKFSEASVSESDDDNNERVDGAEEE
TDDDENAFFDTRDFLSSGSFKSNESDFRPSSFSSDDEGFFALESEDGIDPLIRSVGSNHP
YIKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYL
LDRAYEWGKQGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFS
EKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVT
TSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNPHQVQGMVQDRHGRTVAT
LFGKWDESMYYMNDDFSGKGKGFESMKEAHMLWRRSKPPRFPTRYNLTRFAMTLNELTHG
LKEKLPPTDSRLRPDQRYLENGEFDMANSEKLRLEQRQRQARNMQERGWKPRWFAKDKGS
DTYRYVGGYWEARGWGNWDSCPDIFGQIPTDQLFD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcacccactttgctgcatctccaccgtgtccgatcactcaccggcgaatctatccatg
gcagtcaccgtcagatccaacccggatcccggatcaaccaccgttcaaccacaaaaccaa
aaccaaaaccacaacaacactagtcatttctcaaatcaccaccaccataatcacagcacc
gccagctactgcagcagcaataacggaacggattgtaacaaaaataacaggatgagtcac
cagagagtttcgtctgcaagggagcaaccacttatacaggtggatgtgaagataaatgat
atagtagggaatggaatttcggggattttatataagtgggtgaattatgggaaaggctgg
cggccgagatggtttgttttgcaagatggagtgttgtcgtattataaaattcacggacct
gacaagattcttgttaatcaagagactgagaaaggatccaaaattatcggtgaagaatcc
atgagacggatttctaggcctaagaatgggaattcgcagaataggcgtaagcctgttggt
gaaattcaccttaaggtatcttcgatccgggagagcagatcagatgacaagaggttctca
atatttaccggcacaaagaggctgcacctgagagcagagacacgtgaggatcgcttggca
tggatggaagcattgcaggctgtgaaggatatgttccctcgtatgtctaacagtgaacta
atgggtcctttggacagtgtggcagtctcaactgagaagctcaggcagcggcttcaagaa
gagggagtgagggaggagttgatactggacagtgagcagatcatgaggagtgagtttgcc
gcgctgcagaaccagatagtgctgctcaagcagaagcaatggcttctcattgacacactt
cgccacttagagacagaaaaggttgacttggagaatacagtagttgatgagagccgaagg
cagttgaacgatcaaggcacaacatcttcttctattctgagacaatacaagtttagtgaa
gcaagtgtcagtgaatccgatgatgataataatgaaagagttgatggtgcagaagaagaa
acagatgatgatgagaatgcgttctttgatactcgtgattttctatcatcaggttctttc
aaaagtaatgagtctgattttcggccatcatcattctcttcagatgatgaagggtttttt
gctcttgaatcagaagatggcattgatcctttgattaggtctgttggatcaaaccatcct
tacattaagcgccgtaagaagttacctgatccaattgaaaaagaaaagggtgtgagtcta
tggtcgatgattaaggataacattgggaaggacctaaccaaagtttgtcttcctgtttac
ttcaatgagcctctctcttcactacaaaaatgctttgaagatttggaatattcatatctt
cttgatcgggcatatgaatggggaaaacagggtaatagtcttatgaggattcttaacgtg
gctgcttttgctgtttctggatatgcttcaactgaaggaagaatttgcaaaccatttaat
ccattattaggggaaacatatgaggccgactatccggataagggcctccggtttttctca
gagaaggtcagccatcaccccatgattgttgcatgccattgtgagggtacaggatggaaa
ttttggggcgatagcaatctcaaaagcaaattttggggtcgctcaattcagcttgatccc
gttggagttttgactttggaatttgatgatggagaagtctttcagtggagtaaggttaca
acatcaatatacaatcttatacttggaaaactgtattgtgatcactatggtacaatgcgc
atagaaggaaatcgtgagtattcatgcaagctgaaatttaaggagcagtctattatagac
cgaaatcctcaccaggtgcaaggaatggttcaagataggcatggtagaacagtggcaact
ctttttggaaaatgggatgagagcatgtattacatgaatgatgatttctctgggaaggga
aaggggtttgagtctatgaaagaagcccatatgctgtggaggcgaagtaaaccccccaga
tttcccaccagatacaatttaacacgctttgccatgacattgaatgagctcacccatgga
cttaaggaaaagctgcctcctacagattcaaggcttagacctgaccaaagatacttggaa
aatggtgaatttgatatggcaaattcagagaaactgcgattagagcaacgtcagcgccag
gcccgaaatatgcaggagaggggctggaaaccacggtggtttgcaaaggataaaggaagt
gatacataccgttatgttggcgggtattgggaggccagaggctggggaaattgggattca
tgccctgatatatttggccagattcctaccgatcagctctttgattaa
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