Populus trichocarpa (black cottonwood): 7460967
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Entry
7460967 CDS
T01077
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related isoform X2
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7460967
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7460967
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7460967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3HC4
zf_RING_Vps8
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf_RING_Vps8_fungal
Prok-RING_1
zf-RING_UBOX
PHD
zf-C3H2C3
zinc_ribbon_16
zf-RING_Vps41
PHD_NSD
RINGv
Prok-RING_4
Nop14
DUF3984
BUD22
Motif
Other DBs
NCBI-GeneID:
7460967
NCBI-ProteinID:
XP_024457151
LinkDB
All DBs
Position
5:complement(18656654..18659855)
Genome browser
AA seq
210 aa
AA seq
DB search
MENEERKLASRWVPCTQLEQVHPDNAIAMVLQEQERAFTILTTIESDSNKEESDEASSID
SNEGGNDYEFFQSLEFESEMEFQQEGQDSDSDEDMEEEEDEDEDEIDLDELSYEELIALG
EFIGQEKRGLSVNEISTCLHPWKYRSLANKTGTDRCVICQMEYEEDESLVALSCDHPYHS
ECLTKWLQINKICPICSTEVSSPRNISRTD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaagagagaaaactagcatcgaggtgggtcccttgtacccagctcgaacaa
gtccatccagataatgcaatagcaatggttttgcaagaacaagagagggctttcacaatt
ctcacaaccatcgaaagcgacagtaataaggaagaaagtgatgaagcttcaagcattgac
agcaatgagggtggcaacgactacgagttcttccaaagcctcgaattcgaatctgaaatg
gagttccaacaggaaggacaggatagtgacagcgatgaggatatggaagaggaagaggat
gaggatgaggatgagattgacctggacgagctatcttacgaagagttgatcgcactggga
gagtttatagggcaggagaagagaggactatcagtaaacgaaatatctacttgcttgcat
ccatggaagtatcgatctttagcaaacaaaactgggactgatcggtgtgtgatttgtcag
atggaatacgaagaagatgaatcactggtagctctttcttgtgaccatccttatcattct
gaatgcctaaccaagtggcttcaaatcaacaagatttgccccatttgcagcaccgaagta
tcatcgcctagaaatatttctaggactgattag
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