Populus trichocarpa (black cottonwood): 7460978
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Entry
7460978 CDS
T01077
Name
(RefSeq) agamous-like MADS-box protein MADS9 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7460978
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7460978
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
bZIP_1
Nsp1_C
Hemagglutinin
APG6_N
Motif
Other DBs
NCBI-GeneID:
7460978
NCBI-ProteinID:
XP_002307460
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Position
5:complement(18890183..18892901)
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AA seq
211 aa
AA seq
DB search
MGRGKIEIKRIENASNRQVTYSKRKNGIIKKAKEITVLCDAQVSLVIFASSGRMHEYCSP
STTVVDLLDKYHKQSGKRLWDAKHENLSKEIDRIKKENDSMQIELRHLKGEDISSLHHTE
LMAIEEALDAGLAAVRKKQMEYHSMLEQNEKMLDEEFKRLQFVLQQQEMAMGENAMEMEN
AYHQQRMRDYNFQVPFAFRVQPIQPNLQERM
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggtaagattgagatcaagaggattgagaacgcaagcaacaggcaggtgacc
tactctaagaggaaaaatgggattataaaaaaagctaaggagatcacagttttatgcgat
gctcaagtttctcttgtcatctttgctagttctggaaggatgcatgagtactgcagccct
tccactacggtggtcgatctgttggacaagtatcacaagcagtctggtaagaggctgtgg
gacgctaaacatgagaacctcagcaaagagattgacagaatcaagaaagagaatgacagc
atgcagattgagctgaggcacctgaaaggggaagatatctcatccttgcaccacacagag
ttgatggccatagaggaagccctcgatgctggcctagccgctgtccgtaaaaagcagatg
gagtaccacagcatgttggagcaaaatgaaaagatgttggatgaggagttcaagcgcctc
cagttcgttctgcagcaacaagagatggctatgggagagaatgcaatggagatggaaaat
gcttatcatcaacaaaggatgagggactataatttccaggtgcctttcgcattccgcgtg
cagcctatccagccaaatttgcaagagagaatgtaa
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