Populus trichocarpa (black cottonwood): 7461273
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Entry
7461273 CDS
T01077
Name
(RefSeq) metacaspase-1 isoform X1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7461273
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C14: caspase family
7461273
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Motif
Pfam:
Peptidase_C14
Tmemb_55A
DUF5817
Zn_ribbon_Com
DZR
Ribosomal_L40e
Motif
Other DBs
NCBI-GeneID:
7461273
NCBI-ProteinID:
XP_024444465
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Position
17:3951613..3954257
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AA seq
378 aa
AA seq
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MSGNNHIMMVTRGVVCGKCRHRLSIPTTNSTEVKCPTCNKMNPIPTYEQFGNKDRSIEKL
IVKAKEKISGNDLISSKKPDSLNKKPCPLNIPGSSSSETRPAGKRALLIGVTYKRKHKLK
GTINDVKSMRELLTLNFGFKEENILVLTEQEIEPELIPTKKNILKSLEWLVKGCQAGDSL
VFYFSGHGLSQPDFEGDERDGFAENICPVDFMTEGMIVDNDINSTIVWPLKKGVTLHAIV
DACHSGTVLDLEHVYNRQENKWEDNSPLSGNARKHPDGGLAISLSACLDNQVAADTTAFT
GKTMNGAMTFLLIKILKKYHGATYGDLLDMMHEELEKVNESRCFAEKILKKITKNMLLQK
PQISASKPFDVYKEHFVL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcaataatcacatcatgatggtgactagaggggttgtgtgcggtaaatgtaga
caccgattatcaataccgacaacaaattctacagaagttaagtgcccaacttgcaataag
atgaatccaattccaacctatgaacaattcggtaacaaagatcggagcatcgaaaagtta
atcgttaaggcaaaggaaaagatatcaggcaatgatctaattagtagcaaaaaaccagac
tcgttgaataagaagccctgccccttgaacattccggggtcatcatcatcggagacaaga
ccagcagggaagcgagcactgctgatcggggtgacttacaaaaggaagcacaagcttaag
gggacaatcaatgatgtgaagagcatgagagaattgttgaccctcaattttggcttcaag
gaggagaacattctggttctgacagagcaggagatagaaccagaactaattccaacaaag
aaaaacatcctgaaatccctggaatggctcgtgaagggctgtcaggcaggtgactccctc
gtgttctacttctccggccatggcttaagtcaaccagattttgaaggcgatgagcgagat
gggtttgccgaaaatatttgtccggtggatttcatgaccgaaggcatgatcgttgacaat
gatattaattcaaccattgtttggccgctcaaaaaaggtgtcactcttcatgcaattgtc
gatgcctgtcacagcggaactgtccttgatcttgagcatgtctacaataggcaagaaaac
aaatgggaagataacagccctctatctggaaatgctaggaaacatccggatggtggattg
gcaatatctctcagtgcttgtcttgataatcaagttgctgctgataccaccgcattcaca
ggaaagacaatgaatggagctatgaccttccttttaattaaaattctgaagaaatatcac
ggagcaacatatggtgacctacttgatatgatgcatgaagaattggagaaagttaatgaa
agcagatgctttgctgaaaaaatcttaaaaaaaataacgaaaaacatgttattgcagaag
cctcagatttcagcttccaaaccattcgatgtttacaaggaacattttgttctgtaa
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