Populus trichocarpa (black cottonwood): 7461275
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Entry
7461275 CDS
T01077
Name
(RefSeq) metacaspase-1 isoform X1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7461275
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C14: caspase family
7461275
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GFIT
Motif
Pfam:
Peptidase_C14
Motif
Other DBs
NCBI-GeneID:
7461275
NCBI-ProteinID:
XP_002323763
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Position
17:3976764..3979379
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AA seq
399 aa
AA seq
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MHCACYSALNKVLLSLSFSAAKESFIYYIYTASMDNNRYQIMMEARGVVCCKCRQRLSLL
TQNSTGVKCPICNMMNPVPTCERSRSKDVKAKENISGPDLLISSKKTESLNKMPSPSEIW
RSSSGTRTARKRALLIGVTYKRKHMLKGTINDVKSMRGFLIKNFGFKEENIRVLTAEQDT
TKKNILQSMEWLVKDCQAGDSLVFYFSGHGLRQPDFERDERDGFDENICPVDFMTEGMIR
DNEINSLIVWPLKKDVTLHAIVDACHSGTILDLEHVYNREQNKWEDNSPPSGNARKHTDG
GLAISVSACLDNENAADTSAFTKTMNGALTYLLIYFLKKYPGLTYGDLLDLMHEELRKFN
EGGCLPAKFLRKIFNDLLSQSPQISSSQPFDVYKRHFIL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcctgctattcagctctcaacaaagttttgttaagcctttctttctcggct
gcgaaggaatccttcatatattatatatatactgcttctatggataacaatagataccag
attatgatggaagctagaggtgttgtgtgctgcaaatgtaggcaacgattatcattactg
acacaaaattccactggagtaaagtgcccaatttgcaatatgatgaatccagttccaacc
tgtgaacgatcacgtagcaaagatgtaaaggcaaaggaaaatatatcaggtcctgatctc
ttgattagtagcaaaaagacagagtcgttgaataagatgccctccccttcggaaatttgg
cggtcatcatcggggacaaggacagcaaggaagcgagcactgctaatcggagtgacttac
aaaaggaagcacatgcttaaggggactatcaatgatgtgaagagcatgagaggatttttg
atcaaaaattttggtttcaaggaggagaacattcgggttcttacagcagaacaggataca
acaaagaaaaacatactgcaatccatggaatggctcgtgaaggactgccaggcaggtgac
tccctcgtgttctacttctccggtcatggcttacgtcaaccagattttgaacgcgatgag
cgagatgggtttgatgaaaatatttgcccagttgatttcatgacagaaggtatgatccgt
gacaatgaaatcaattccctcatagtttggccgctgaaaaaggatgttactcttcatgca
attgtcgatgcttgtcacagtggaactatccttgatcttgaacatgtctacaatagggaa
caaaataaatgggaggataacagccctccatctggtaatgcaaggaaacacacggatggt
ggattggcaatttcagtcagtgcttgtctggataatgaaaatgctgccgatacctctgca
ttcacaaagacaatgaatggtgctctgacctaccttttaatatactttctgaagaaatat
cctggattaacatatggtgacctacttgacttgatgcatgaagagttgaggaaatttaac
gaaggtggatgccttcctgcaaaattcttgagaaaaatattcaacgacctgttatcgcag
agtcctcaaatttcatcttcccaaccattcgatgtttacaagagacatttcatcttgtaa
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