Populus trichocarpa (black cottonwood): 7461277
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Entry
7461277 CDS
T01077
Name
(RefSeq) metacaspase-1 isoform X1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7461277
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C14: caspase family
7461277
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GFIT
Motif
Pfam:
Peptidase_C14
zf-LSD1
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
7461277
NCBI-ProteinID:
XP_024445081
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Position
17:3999506..4007853
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AA seq
427 aa
AA seq
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MVGTRAKGKVEGGIQQTKVTTSVPARASPSSPSPLTKQPQGKEMAIEKCSRCGVQLVVPP
DAQAIRCAVCQAVTRVHSYYPLAQARESASRITSGLISMVSGNITTMTSSVSSSSYPVPG
YGGYYAQPPIRPVLQLPLPSMHGRKRALLCGVSYRGKSYKIKGSINDVKCMRYFLVEKFG
FPNDSILMLTEDETNPLQIPTKENIRLALRWLVQGCQPGDSLVFHFSGHGSKQLDYDMDE
VDGFDETLCPLDYETQGMIVDDEINETIVRPLPQGVTLHAIIDACYSQTMLDLPFVCRMN
REGYYTWEDQTLSPYACKGTSGGLALCISACDDNQTSVDTTALAGNVSTGALTYCFIQAV
QNEPGLTYGRLLNSMRQVIRGAKTGGLRLNGPIASLVNKALFNTEITQEPQLSSSETFDI
YAKQFIL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcacaagagcaaaagggaaagtagaaggaggtatacagcagacgaaagtcacc
accagcgttccagccagagcttcgccatcgtctccgtcgcctctaacaaagcagcctcag
ggaaaggaaatggcaatagaaaaatgtagccggtgtggtgtgcaactagttgtgccccca
gacgctcaagcgattcgatgtgctgtgtgtcaagccgtcaccagggttcattcctactac
cctctggctcaagcccgcgagtcagctagcaggattacttctggtcttattagcatggtt
tctggcaacattaccaccatgactagttcggttagtagcagtagctatcctgtgccgggt
tatggtggttattatgctcagccaccaattaggcccgtactgcagttgcctcttccttca
atgcatgggaggaaacgggctctgctttgtggagtaagctatcgaggcaagagttataag
atcaaaggaagtattaatgatgttaagtgcatgagatattttcttgtcgagaagtttggg
tttcccaatgactccatactcatgctcacagaagatgagacaaacccattacagatacca
acaaaagagaacataaggctggctttaaggtggcttgttcaaggctgccagccaggggac
tcgttagtgtttcacttctctggccatggttcaaagcaacttgattatgacatggatgag
gttgatgggtttgatgaaactttatgcccccttgactatgaaactcaagggatgatagtt
gatgatgaaatcaatgagaccattgtaaggccattgccacaaggagtcacacttcatgcc
attattgatgcctgctatagtcaaactatgcttgatcttccatttgtgtgcaggatgaat
agggaaggatactatacatgggaggaccaaactctttcaccatatgcttgtaaaggcacg
agtggagggctggcactttgtatcagtgcttgcgatgataatcaaaccagtgttgatacg
acagcattggcaggcaatgtttcgactggtgccttgacgtattgcttcatccaagcagtg
caaaatgaacctggattaacatatggacgcctgcttaattctatgcgccaggtgattcgt
ggggcgaaaactggtggattacgcctaaatggtcccatcgcatccctagtaaataaagct
ctgttcaacactgagataacacaggagcctcagctttcctcgtccgagacatttgacatc
tacgcgaagcagtttatactgtaa
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