Populus trichocarpa (black cottonwood): 7461299
Help
Entry
7461299 CDS
T01077
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K23213
paired amphipathic helix protein Sin3b
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7461299
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
7461299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
7461299
NCBI-ProteinID:
XP_002323786
LinkDB
All DBs
Position
17:4437675..4440093
Genome browser
AA seq
642 aa
AA seq
DB search
MKRCGDYSEDYIHFIFSQQPPEEVDPFINYVKKVKARFQHDQPEKKIRSLIRIAEDAIMS
EAARDGAVAGMPQDFQERIKAILGGYNDLIDGYNSLMPPCHQISLDDVEKKETEESKKSG
FLDAMDSLNKPRIECGEDGFEENLNLFKEGSRVLVDVNDFSPKLTEGRPDLLEDVLRFMP
PFEAKPLAYHLPDLRSVDLTNSGVDEREKSSPENIEDCETEIVRADESKESGCSLNDEEK
EETVADTASKTNGFREATDFVNKLRIKCGADDYEEFLQIFRFYKKGSRNWVDVCDSGLGL
TEGHPDLQEEFLRFMAITEAKPLTYRLPDLQSSDLTKSRVDEQQKRTPEKRKVCPKTDQE
RKFVKANGSGCVSEQIGEGIGFLENVKKSLSCEVSYKKFLKLFFAYSKGKVERAELEDMV
SSLIGNYPDLMGEFLQFWKNYESLGALEVRGCKEKDKRRERRRNKPIEELDLSTCAKCTP
GYLILPEEHRNNTKRHKSQVLNDEVISVSSRLRGNSFKNRRLNQYENNLFECEDEQFELN
MLLEWFKSADIYAEELGGVTVQNEERNGSPVSFQRCIERLYGDQGVEVLDIFHKDTQHAL
PILRTRLQQKIAELTEYRDSLRSSWIEVYARNYHKSLGLRHC
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatgcggagattacagtgaagattacatccatttcatcttctctcagcaacct
ccggaagaagttgaccctttcataaactatgtcaagaaagtgaaagcccggtttcaacat
gaccagcctgagaaaaaaatccgcagccttatcaggatcgcggaagatgccatcatgtca
gaagctgcacgtgatggtgcagtggcagggatgcctcaagatttccaagaacgaattaag
gcaatccttggaggttataatgacttgattgatgggtacaactcattaatgccgccttgc
catcaaatcagccttgatgatgtggagaagaaggaaactgaggagagtaagaaaagcgga
tttctagatgctatggattctctaaacaagccgaggatcgaatgtggtgaggatggtttt
gaggagaatttgaacttgttcaaggaagggtctagggtgttggttgatgtcaacgatttt
tctcctaagctaaccgaaggccgtcctgatttgctagaggacgttcttagatttatgcca
ccttttgaagcaaaacctttggcctatcatcttccagatttgcgatctgtagacctcacc
aacagtggggttgatgaacgtgagaaaagcagtcctgaaaatattgaagattgcgagaca
gaaattgttagggcagacgagtctaaagaaagtggctgtagccttaatgatgaggagaag
gaggaaacagttgcagacacggcaagtaagacaaacggatttcgagaggccacggatttt
gtaaacaagctgaggatcaagtgtggtgcggacgactacgaagaattcttgcaaattttc
aggttttataagaaagggtctaggaactgggttgacgtctgcgattctggtctcggccta
accgaaggccatcctgatttgcaagaagagtttcttagatttatggcaattactgaagca
aagccattgacttatcgccttccagatttgcaatcttcagacctcaccaaaagtagggtt
gatgagcagcagaaaaggactcctgaaaaaaggaaagtttgcccaaagactgatcaagaa
agaaaatttgtcaaggcaaatggatctggatgtgtctcagaacagattggagaaggaatt
ggcttcctagagaacgttaagaagagtctttcttgtgaggtgagttacaagaaattctta
aagcttttctttgcttacagcaagggaaaagttgaaagggcagaattagaagatatggtt
tccagtttgataggaaattatcctgatctgatgggcgagttccttcaattctggaagaat
tatgagagtttaggtgcacttgaagtaaggggatgcaaagagaaggacaaaaggagggag
aggcgtaggaataaaccgattgaagaacttgatctctctacgtgtgcaaagtgcactcct
ggatatctaatcctccctgaagagcataggaacaacacgaagagacataaatcccaagta
ctgaatgatgaggtaatatccgtgtcttcaagactgcggggcaactcctttaagaacagg
cgtctaaatcagtatgaaaacaacttgtttgaatgtgaagatgaacaatttgagctgaac
atgttgttggaatggtttaaatcagctgatatatacgcagaggaactgggaggagtcact
gtccaaaatgaagagagaaacgggagtccagttagcttccagaggtgtatcgaacgctta
tatggtgatcagggagttgaggttcttgacatattccataaagatacacagcacgcactg
cccatcttaagaacgcgcttgcaacagaaaatagcagagctgactgaatatcgcgacagt
ctaagaagtagctggattgaagtatatgctagaaactatcacaaatcacttggccttcga
cactgctga
DBGET
integrated database retrieval system
