Populus trichocarpa (black cottonwood): 7461344
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Entry
7461344 CDS
T01077
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
7461344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7461344
03110 Chaperones and folding catalysts [BR:
pop03110
]
7461344
03029 Mitochondrial biogenesis [BR:
pop03029
]
7461344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7461344
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
7461344
Messenger RNA biogenesis [BR:
pop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
7461344
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
7461344
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
7461344
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7461344
Exosomal proteins of other body fluids (saliva and urine)
7461344
Exosomal proteins of breast cancer cells
7461344
Exosomal proteins of colorectal cancer cells
7461344
Exosomal proteins of bladder cancer cells
7461344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Antitox_halo
Motif
Other DBs
NCBI-GeneID:
7461344
NCBI-ProteinID:
XP_002303983
UniProt:
B9GXY0
LinkDB
All DBs
Position
3:complement(21574861..21579281)
Genome browser
AA seq
607 aa
AA seq
DB search
MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRFGRPQNVVLPRSRPLKV
NAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSADNSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLISILED
AIRAGYPVLIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VVREEVGLALDKVGKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQD
YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKDSLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSTDNPKF
GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPM
DNSGYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacttttacggccatgtcctcggttggaaccttggctgctcccaatggccgt
gttatggataagaagtttgtattttcttcaaacaagttgtcatctttcgcttccatttct
gcaagtcgatttggtaggccacagaatgtagttctaccaagatcacgtcctctcaaggtt
aatgctgccaaggagctgcacttcaacaaggacggttctgcaattaagaaattgcaaact
ggtgtgaacaagcttgcagatttagttggggttacccttggacctaaaggccggaatgtt
gttcttgagagcaaatacggttcgcctaaaattgttaatgatggcgtgactgttgctaaa
gaggttgaattggaggatccggttgagaatattggtgctaagttagtgagacaagctgct
gccaagacaaatgacttggctggtgatgggactacaacatctgttgttcttgcgcaaggc
cttattgcagaaggtgtcaaggttgtggctgctggtgcaaaccctgttttaatcactaga
ggcattgagaagaccacaagagctctcgtaaacgaacttaagttgatgtcgaaagaggtt
gaagacagtgaacttgcagatgtggcagctgttagtgctgggaacaactatgaagttggg
aatatgatagctgaagctatgagcaaagttggtcggaagggagtggtcacccttgaagag
ggaaagagtgctgataacagcctctatgttgttgagggaatgcagtttgaccgtggttat
atctcaccttactttgtcactgatagtgaaaaaatgtcagttgaatatgagaactgcaag
ttgcttcttgttgacaagaaaataacaaacgcaagagatctaatctccattttggaagat
gcaattagagctggatatccagttttgataattgctgaagacattgaacaagaagcttta
gcaactcttgttgtcaataagcttaggggtgctttgaagattgctgccctcaaagctcct
ggttttggggaacggaaaagtcagtaccttgatgacattgctattctgactggaggaact
gttgtcagagaagaggtggggcttgccttggacaaagtaggcaaagaggtcttgggacat
gcttctaaagtggttcttaccaaggacacaaccaccattgttggtgacggaagcacccaa
gaagcagtaaataagagagttgctcaaattagaaatcttatcgaggctgctgaacaagac
tatgaaagggagaaactcaatgaaagaattgctaagctgtccggcggtgttgcagtgata
caggttggagcacaaaccgagacagagcttaaagaaaagaaactgagagttgaagatgct
cttaatgcaaccaaggcagccgttgaggaaggtattgtggttggtggtggatgcaccctg
ctgagactggcatcaaaggtggatgctatcaaggacagtctcgagaacgatgaagaaaag
gtgggagcagacattgtaaagagagctctgagctaccccctgaagttaattgccaaaaat
gctggtgttaatggaagtgtggtcagcgagaaggtgctctcaactgacaatcctaaattt
ggatacaatgctgcaactggaaattatgaagatctgatggctgctggaatcattgatcca
acaaaggtggtcagatgttgcctggagcatgcatcatcggtagcaaagacgttcttgatg
tccgactgtgtagttgttgagattaaggagcctgaatcagtgcctgctggcaaccccatg
gataactcaggatatgggtactag
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