Populus trichocarpa (black cottonwood): 7461353
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Entry
7461353 CDS
T01077
Name
(RefSeq) calpain-type cysteine protease DEK1 isoform X1
KO
K25378
calpain-type cysteine protease DEK1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7461353
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C2: calpain family
7461353
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
7461353
NCBI-ProteinID:
XP_024452980
LinkDB
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Position
3:complement(21501662..21517809)
Genome browser
AA seq
2157 aa
AA seq
DB search
MEGEQHGIVLACAISGTLFASLGLGSCWILWAVNWRPWRIYSWIFARKWPYILQGPQLGI
LCRFLSLFAWIIVVSPVLMLIMWGSWLIVILHRDIIGLAVIMAGTALLLAFYSIMLWWRT
QWQSSRAVAILLLLAVALLCAYELCAVYVTAGKNASQRYSPSGFFFGVSAIALAINMLFI
CRMVFNGNGLDVDEYVRRAYKFAYSDCIEMGPIPCSPEPPNPNELYPRQSSRASHLGLLY
FGSLVVLLVYSILYGFTATEARWLGFITSAAVIILDWNMGACLYCFQLLQSRVVALFVAG
TSRVFLICFGVHYWYLGHCISYAVVASVLLGAAVSRHLSVTNPLVARRDALQSTVIRLRE
GFRRKEQNTSSSSSEGCGSSVKRSSSVEAGPLGNIVDSGNQSTVQCTTDASNWNNVLCRN
ASSHEGINSDKSTESGRPSLALRSSSCRSVVQEPEAGMSGDKFFYQNNSLVVCSSSGLDS
QCCESSASNSANQQLLDLNLALAFQERLNDPRITSMLKKRAREGDRELATLLQDKGLDPN
FAMMLKEKNLDPTILALLQRSSLDADRDHRDNNDITIVDSNSVDNVMPNQISLSEELRLQ
GLEKWLQLSRFVLHHIAGTPERAWVLFSFIFIVETVIVAIVRPKTIKIINTVHQQFELGI
AVFLLSLVVCSIMTFLRSLQVEEMAMTSKPRKYGIIAWLLSTGVGLLLSFLSKSSMLLGL
SLTVPLMVACLSVAIPIWIHNGYHFWPQVQSAGHAGNHRPPGTKEGIVLIVCTIVFIGSV
VALGAIVSAKPLDELGYRALTTGQKSFSSAYASPAYLGWVMASAIALIVTGVLPIVSWFA
TYRFSLSSAVCVGIFAVVLVAFCGVSYLEVVQSRDDQVPTKGDFLAALLPLVCIPALLSL
CCGLLKWKDDDWKLSRGVYIFVIIGLLLLLGAISAVVVVVKPWTIGVAFLLILLLIVLAI
GVIHHWASNNFYLTRTQTLFVCFLAFLLGLAAFLVGWFGGKPFVGASVGYFAFLFLLAGR
ALTVLLSPPIVVYSPRVLPVYVYDAHADCGKNVSGAFLMLYGIALATEGWGVVASLNIYP
PFAGAAVSAVTLVVSFGFAVSRPCLTLKMMDDAVHFLSKDTIVQAITRSATKTRNALSGT
YSAPQQSASSTALLVGDPTAARDKAGNLVLPRDDVMKLRDRLRNEELLVGSFFCRMRYRT
FRCDSASGLDHRREMCAHARILALEEAIDTEWVYMWDRFGGYLLLLLGLTAQAERVQDEV
RLRLFLDSIGFSDLSAKKIKKWMPEDRRQFEIIQDSYLREKEMEEEILMQRREEEGKGKE
RRKALLEKEERKWKEIEASLISTIPNAGSREAAAMAAAVRAVGGDSVLSDSFARERVSSI
ARRIRTAQLARRALQTGVTGSVCVLDDEPTTSGRHCGEIDPSVCQSRKVSFSIAVMIQPE
SGPVCLLGTEFQKKECWEILVAGAEQGIEAGQVGLRLITKGDRQTTVAKEWSISATSIAD
GRWHIVTMTIDADLGEATCYMDGGFDGYQTGLPLSVGSSIWEQGTEVWVGVRPPIDMDAF
GRSDSEGAESKMYIMDVFLWGRCLTEDEIASLHTAIGSTEFGMIDYHEDNWQWADSPPRV
DEWDSDPADVDLYDRDDVDWDGQYSSGRKRRSDREGVVIDVDSFARRFRKPRIETQEEIN
QRMLSVELAVKEALCARGEANFTDQEFPPNDQSLYMDPANPPSKLQVVSEWMRPVEIVKE
SHLDSHPCLFSGAANPSDVCQGRLGDCWFLSAVAVLTEVSRISEVIITPEYNEEGIYTVR
FCIQGDWVPVVVDDWIPCESPGKPAFATSQKGNELWVSILEKAYAKLHGSYEALEGGLVQ
DALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVHISSSG
IVQGHAYSLLQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSKD
GIFWMSWQDFQIHFRSIYVCRVYPPEMRYSVHGQWRGYSAGGCQDYASWNQNPQFRLRAT
GPDASLPIHLFITLTQGVSFSRTAAGFRNYQSSHDSMMFYIGMRILKTRGRRASYNIYLH
ESVGGTDYVNSREISCEMVLDPDPKGYTIVPTTIHPGEEAPFVLSIFTKASVILEAL
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaacagcacgggattgtactggcctgtgctatttcagggaccctttttgcc
agtttgggtttgggttcgtgttggattctatgggcagtgaattggaggccatggaggatt
tatagttggatctttgccagaaaatggccatatatcctacaaggtccccagctgggcata
ttatgtcgttttctctctctttttgcatggataattgttgtatctccggttctaatgctt
atcatgtggggaagctggttaattgtaatattgcatcgcgatataattggtctggctgta
atcatggctggtactgctcttctattggcattctattcaatcatgctctggtggagaaca
caatggcaaagttcaagggcagttgctattcttcttcttctggctgttgcccttctctgt
gcatatgaattatgtgctgtgtatgttacagctggaaaaaatgcttctcagcgatattca
ccctccggtttcttttttggtgtatcagctattgccttggcaattaacatgctctttatt
tgccgaatggtctttaatgggaatggcttagatgtggatgagtatgtgcggagggcatac
aaatttgcttatagtgattgtatagaaatgggtccaattccttgctctccagagccacct
aaccccaatgaattataccctcggcaatccagcagggcttcacatcttggacttctatac
tttggctcgcttgtggttcttctcgtctattccattttatatggttttacagcaacagaa
gcacgctggcttgggttcattacatcagctgctgtcattattcttgattggaacatgggg
gcatgcttgtattgtttccagcttcttcaaagccgtgtggtggcacttttcgttgctggc
acatctcgagtttttcttatatgctttggggtgcattactggtatttgggtcattgcatt
agttatgctgttgtagcatctgtgctattaggtgctgctgtttctcgtcatttgtcagtc
acaaatcctttagttgctagaagagatgccttacagagcacagtgattcgcctcagagag
ggttttcgcagaaaggaacagaacacttcatctagctcttctgaaggttgtggctcaagt
gtaaaacgtagtagtagtgttgaagcaggtccacttggtaacattgttgattctggtaac
cagtccacagtgcagtgtacaactgatgctagtaactggaataatgttctatgtcgaaat
gccagttctcatgaggggatcaatagtgataaaagcacagaaagtggaaggccaagttta
gcattacgtagcagttcttgtcgttcagttgtccaagagcctgaagctgggatgtctggg
gataagtttttttatcagaataattccctagtggtttgctctagcagtggtcttgatagt
caatgctgtgaatctagtgcatcaaattctgcaaatcaacaactgttagatttgaacctt
gctcttgcctttcaggaaaggttgaatgatcctaggattacatctatgctgaaaaagagg
gcaagggaaggtgatagagaattggctactttactgcaggataaaggactggatcctaat
tttgccatgatgttgaaggagaagaacttggatcccactatcctggcattactccagagg
agcagtttggatgcagatagagatcatcgtgacaataatgatatcacaattgttgactca
aatagcgttgacaatgttatgcccaatcaaatttctctttcagaagaactaaggcttcag
gggcttgaaaagtggcttcagttgtctagatttgttctgcatcacatagcaggcactcct
gagcgagcatgggtgctctttagtttcatcttcattgtggaaacagttattgtggcaatt
gttcgtcccaagacaattaaaattataaatacagtacatcaacagtttgagcttgggatt
gcagtatttctattatctcttgttgtttgctcaatcatgacttttcttcggtcacttcaa
gtagaagagatggccatgacatcaaaacctcgcaagtatggtattattgcttggctgctt
agcactggtgttggattgttgctttccttcttgagcaaatcatcaatgcttctaggatta
tccttgactgttccactcatggtggcttgtctttctgttgcaattcctatttggattcac
aatggctaccacttttggcctcaagtgcagtctgcaggtcatgctggaaatcatcgtcct
cctgggacaaaggagggtattgttcttattgtttgtacgatagtatttattggatctgtg
gtagctttgggtgctattgtgtctgcaaagccgctagatgaattgggatacagggcattg
accactggtcagaaaagctttagttctgcttatgcatcaccagcataccttggttgggtg
atggcatctgcaattgctttaatagtcactggtgtgctaccaattgtttcatggtttgca
acatatcggttttccctgtcttctgctgtatgtgttgggatatttgcagttgttcttgtg
gcattttgtggtgtatcctatttggaagttgtccaatctagggatgaccaggttccaaca
aagggtgattttcttgctgcactacttcctcttgtgtgcattccagcattgctatcactt
tgctgtggattgcttaaatggaaagacgatgattggaaactttctcgaggtgtatatata
tttgttattattggtcttcttcttctgcttggtgcaatatctgctgttgtagttgtggtt
aagccatggactataggggtagcattcctcttaattcttctcctgatcgtactagctatt
ggtgttatccatcattgggcttcaaacaatttctatttgaccaggacacagacgctcttt
gtttgtttccttgcttttcttttgggcttggcagcatttcttgttggatggtttggagga
aagccttttgtaggagcatccgttggttattttgcatttttgtttcttcttgctggacga
gcattgactgtcctgctgtcaccacccatagtagtttattcaccacgagtactgcctgtt
tatgtttatgatgcccatgcagattgtggaaagaatgtcagcggtgcatttctcatgctt
tatgggatcgctttggcaactgaaggatggggtgttgttgccagtttgaatatttatcca
ccatttgctggtgctgctgtatctgcagttactcttgttgtatcctttgggtttgctgtc
tcacgtccatgcctgactttaaagatgatggatgatgcagttcattttctcagcaaggat
accattgttcaagcaattacacgatctgccactaagacaagaaatgctttgtctggaaca
tattccgcacctcagcaatctgctagttcaacagctcttttggttggggaccctactgct
gcacgtgataaggcagggaaccttgtgcttcctagggatgatgtcatgaaattgagagac
cgtctaagaaatgaggaattgctagtaggatctttcttctgcaggatgagataccgaaca
tttcgatgtgactcagctagtggtttagatcacagaagggaaatgtgtgcccatgcacga
attttggctttagaagaggcaattgatactgaatgggtatatatgtgggacagatttggt
ggttacttacttcttctgcttggtttgactgctcaggcagaaagagtacaggatgaggta
cgcttgaggctttttcttgatagcataggtttctcagacctaagtgccaagaaaatcaag
aagtggatgccagaggaccgtaggcaatttgagattattcaggatagctatctgagagaa
aaggagatggaagaggaaatcttaatgcaaagacgtgaagaggagggtaagggtaaagaa
agaaggaaggcccttttggagaaggaagaacgcaaatggaaggagattgaagcttctctc
atttccacaattcctaatgctggcagcagggaggcggcagccatggcagctgcagtgcgt
gctgtaggaggtgattcggttctcagtgattcctttgcacgggaaagggtttcaagcatt
gcccgtaggatacgcacagctcaattagctcgccgagcactgcagaccggagttacaggt
tctgtatgtgttcttgatgatgaaccaaccacaagtggcaggcactgtggtgagatcgat
cccagtgtatgccaaagtagaaaggtcagtttttccattgctgttatgatccaacctgag
tctggaccagtttgccttctaggcactgaatttcagaagaaagaatgctgggaaattctg
gtggctggtgctgagcaaggtattgaggctggacaggttgggcttagattaatcactaaa
ggtgataggcagacaactgttgccaaggagtggagtatcagtgcaacaagtattgcggat
ggaaggtggcatattgtgacaatgacaattgatgctgatttgggtgaagcaacttgctat
atggatggtggctttgatggctaccaaactgggctaccattgtctgtgggcagtagtatc
tgggaacaggggacagaagtttgggttggtgttaggccaccaatagatatggatgcattt
ggaaggtcagatagtgaaggagccgagtctaagatgtatataatggatgttttcttatgg
ggaaggtgcttaactgaagacgagattgcctctcttcacactgcgataggctcaacggag
tttggtatgattgactaccacgaagataattggcagtgggcagattcaccccccagagtt
gatgagtgggatagtgatcctgcagatgtagatctttatgatagggatgatgtggattgg
gatgggcaatattcaagtgggaggaaaagaagatcagatcgtgaaggagtggtgatagat
gttgattcttttgctaggaggtttaggaaacctaggatagaaacccaggaagaaattaat
caacgaatgctttcggttgaattggctgttaaagaagccttgtgtgctagaggagaagca
aattttactgatcaggagtttcctccgaatgatcaatcattatacatggatcctgcaaat
cccccttcaaagttgcaggttgtctctgagtggatgaggcctgtggaaatagttaaggaa
agccatctagactcccacccgtgcttgttttctggggctgcaaatccctctgatgtttgt
cagggtcgtttaggtgattgttggtttctaagcgctgttgctgttctaacggaggtatcg
cgaatatcagaagtgattattaccccagagtataatgaagaaggaatttacacggttcgc
ttttgtattcagggtgactgggtcccagttgttgttgatgattggattccatgtgaatca
ccaggtaaacctgcatttgctaccagccagaagggtaatgaactctgggtttctatattg
gagaaagcgtatgcgaaattgcatggttcttacgaggcattggaaggcgggcttgttcag
gatgcccttgtggaccttactggaggtgctggtgaagagattgacatgcggagtgctcag
gcccagattgatcttgcaagtggtagactgtggtctcaattgttgcgctttaaacaagaa
ggctttctactgggtgcagggagtccatctggttctgatgttcacatttcttccagtggt
attgtgcagggccatgcgtactctttgctgcaggtaagagaggtggatggccataagctt
gttcaaattcgaaatccatgggctaatgaagtagagtggaatggaccttggtctgactca
tctcctgaatggactgataggatgaagcacaagttaaagcatgttccacagtccaaagat
ggtatattttggatgtcctggcaagactttcaaatccacttccggtcaatatatgtatgt
cgtgtctatccccctgagatgcggtattctgttcatggccaatggcgaggctacagtgct
ggtggatgccaagattatgcttcctggaatcaaaatccacaattccgattgagggccact
ggtccagatgcatcattaccaattcacttgttcatcactttaactcagggtgtgagtttc
tctagaacagcagctggtttcagaaattaccaatccagtcatgattcaatgatgttctac
attggaatgaggattctgaaaactcgtggtcgccgtgcttcctacaacatttacctacac
gaatcagttggcgggacagattatgtcaattctcgagaaatatcatgtgaaatggttttg
gatcctgatccaaaaggttacacaattgtacccacaactatacatcccggggaagaagca
ccatttgttctctccattttcaccaaagcatcagtaatcctggaagctttgtaa
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integrated database retrieval system
