Populus trichocarpa (black cottonwood): 7461476
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Entry
7461476 CDS
T01077
Name
(RefSeq) myosin-6
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7461476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7461476
04131 Membrane trafficking [BR:
pop04131
]
7461476
03029 Mitochondrial biogenesis [BR:
pop03029
]
7461476
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7461476
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7461476
mRNA cycle factors
P-body specific factors
7461476
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7461476
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7461476
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7461476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
ProQ_C
AAA_16
AAA_22
DUF2120
DUF87
Motif
Other DBs
NCBI-GeneID:
7461476
NCBI-ProteinID:
XP_002303100
UniProt:
B9GRA7
LinkDB
All DBs
Position
2:complement(24315757..24329770)
Genome browser
AA seq
1513 aa
AA seq
DB search
MASAASLVVGSLVWLEDPDEAWIDGEVVEINKEDIKVLCTSGKTVTVKASKTYPKDAEAP
PCGVDDMTKLAYLHEPGVLQNLRSRYDMNEIYTYVGNILIAVNPFTRLPHLYNSHMMAQY
KGASFGELSPHPFAVADASYRLMMNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQGGRISGAAIRTYLLE
RSRVCQLSDPERNYHCFYMLCAAPPEDVQKYKLGNPRTFHYLNQSNCYELDVVDDSKEYI
ATRRAMEIVGISAEEQDAIFRVVAAVLHLGNIEFAKGKEMDSSVPKDEKSWFHLRTVAEL
LMCDSKALEDSLCKRVIVTRDETITKWLDPESAAVSRDALAKVVYSRLFDWLVDKINSSI
GQDPHSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFAKPKL
ARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALMGASKCSFVSGLFPPLAEESSKQS
KFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNALQQLRCGGVMEAI
RISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVTACKRLLEKVGLTGYQIGKTKVFLR
AGQMAELDARRSEVLGRSASIIQRKVRSYLSRRSFITLRRSAIQIQSACRGQIARHVYEN
MRREAASLRIQRDLRMYIARKAYKDLCYSAISIQTGMRGMAARDDLRFRRQTRAAIMIQS
QCRKYLARLHYKKLKKAAITTQCAWRGRVARKELRNLKMAARETGALQAAKNKLEKQVEE
LTWRLQLEKRMRADVEEAKTQENAKLQSALQEMQLQFKETKEMLVKEREAAIKVTEKVPV
IQEVPVVDHVALEKLTIENEKLKALVTSLEKKIDETEKKFEETSRISEERLKQALEAESK
IVELKTAMHRLEEKFSDIETENQVLRQQGLLQTPAKKLSERPPIPPTQSLENGHHLNDEN
KANEPQSATPVKTYGTESDSKFRRSHIERQHENIDALISCVTNNIGFSHGKPVAALTIYR
CLLHWKSFEAERTSVFDRLIQMIGSAIENEENNEHMAYWLSNTSTLLFLLQRSIKAAGAS
ATPQRKPPSATSLFGRMTMGFRSSPSSSNLAAAAALAVVRQVEAKYPALLFKQQLAAYVE
KIYGIIRDNLKKELASLLSLCIQAPRTSKGSVLRSGRSFGKDSPLSHWQSIVDSLNTLLS
TLKQNFVPPVLIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWSAQA
KEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNY
NTRSVSPGVISSMRVLMTEDSNSAVSNSFLLDDNSGIPFSVDDLSNSLQEKDFMDVQPAE
ELLENPAFQFLHE
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgctgccagtctggtggttggatctcttgtttggctggaagaccctgatgaa
gcttggatagatggtgaagttgtggagataaacaaagaagacattaaggtcctctgcacg
tctggaaagacggtcactgtcaaggcttccaaaacataccctaaggatgctgaagcccct
ccatgtggagtggatgacatgacaaaactggcttatctgcatgaaccaggtgtcctacag
aatttgagatcgagatatgacatgaacgaaatttatacttacgttgggaatatattgatt
gctgtgaacccttttacgaggctaccacatctgtataatagtcacatgatggcccaatat
aaaggggcaagctttggtgagctgagcccacacccttttgctgttgcagatgcttcatac
agactaatgatgaatgaaggaataagccagtcaattttagttagtggtgagagtggtgct
ggtaaaacggaaagcacaaaattgcttatgcgctaccttgcttacatgggagggagagct
gcaactgaggggaggactgttgagcagcaagtcctggagtctaatcctgttctggaagca
tttggtaatgcaaagactgttagaaacaataattcaagtcgttttggtaagttcgtggag
attcagtttgatcaggggggacggatttcaggagctgctatcagaacttatttgctagaa
aggtcacgtgtttgtcagctttctgatcctgagagaaattaccactgtttttacatgctt
tgcgctgcaccccctgaggatgttcaaaagtacaaattagggaatccaagaacattccat
tatcttaatcaatcaaattgctatgaattggatgttgtggatgattccaaggaatacatt
gccacaagaagagcaatggagattgttggaataagtgctgaagagcaggatgccatattt
cgagttgtggctgcagtcctccatcttggaaacattgagtttgcaaaagggaaggaaatg
gactcatcagtgcctaaagatgaaaagtcttggtttcatttaagaactgtggctgagctt
ttaatgtgtgattcaaaagcattggaagactctctctgcaaacgtgtaattgttacccgt
gatgaaaccattacaaagtggctggatcccgaatctgccgcagttagtagagacgcgttg
gcaaaagttgtgtattcaaggctgtttgattggcttgttgataagattaatagttcaatt
ggtcaagaccctcactcaaagtacttaattggtgtgctggatatttatggatttgagagt
ttcaagacaaacagttttgagcaattttgcatcaatttgacaaatgagaagcttcagcag
catttcaatcagcatgttttcaaaatggagcaagaagaatatacaaaagaagaaatcgat
tggagctacattgagttcgttgataatcaagatattctggatctcattgaaaagaaacct
ggtggtataattgctcttctggatgaagcttgcatgtttccaagatcaacacatgaaaca
ttcgcccaaaagttataccagacatttaaaaaccacaagcggtttgccaagccaaaatta
gcccgaagtgatttcacaatttgccattatgctggtgatgtcacatatcaaacagaatta
ttcctggacaagaacaaagattatgttgttgctgaacatcaggcactcatgggcgcttcc
aaatgttcctttgtgtcgggtttatttccacctttagcagaagaatcttccaaacaatca
aagttctcttcaataggttctcggtttaagcaacaactgcaagcattacttgaaactctc
agtgcaactgagccacattacattcgatgtgtaaagcccaataatcttcttaagccagcg
atctttgagaataagaatgctcttcaacaactgcgatgtgggggagtcatggaggcaatt
agaattagttgtgctggatttcctactagaaagacatttgatgaatttgtagatcgattt
ggccttctcgcacctgaagttttggatgggagttcggatgaagtcactgcttgcaagagg
ctccttgagaaggttgggctcacgggctatcagattggtaaaaccaaggtatttcttagg
gctggtcaaatggcagaattggatgctcgtaggagtgaggtcttaggaagatcagctagc
attattcagaggaaagtccggtcatatttgtctcgcagaagctttattacacttcgtcgg
tctgcaatacagattcaatctgcatgcagaggacaaattgctcgccatgtctatgagaac
atgcgcagggaggctgcttctctgagaatccaaagagatttacgcatgtatattgctagg
aaagcttataaagatttgtgttattctgctatatcgattcaaacaggcatgcgtgggatg
gctgctcgggatgatttacgcttcagaaggcagactagagcagcgattatgatccagagt
caatgtcgcaaatacctggcccgattacattataagaagttaaagaaagcagcaatcaca
acgcaatgtgcatggagaggaagagttgctcgtaaagaactgcgaaatcttaagatggct
gcaagagaaacaggagctcttcaggctgccaagaataagttggaaaagcaagttgaagaa
ttaacatggagacttcagctggagaaacgcatgagggctgacgtggaagaggccaaaaca
caagaaaatgcaaagctacaatctgctctgcaagaaatgcaacttcagttcaaagaaact
aaagaaatgctagtgaaggaacgtgaggctgccataaaggtgacagagaaagtacctgtt
atacaggaggttccagtagtagaccatgtggccctggagaagcttactatagaaaatgag
aaactcaaggctctggtaacatcactggaaaagaaaattgatgaaacagagaaaaaattc
gaagagacaagcagaataagtgaggaaagattgaagcaagctttggaggcagaatcaaaa
atagttgaattgaagactgctatgcataggcttgaagaaaagttttctgacattgaaacg
gagaaccaagttcttcggcagcaagggctgttacaaacacctgcaaagaagctgtcagag
cgtcctccaattccaccaactcagagtttggaaaatggccaccatctgaacgatgagaat
aaagccaatgagccacagagtgcaacaccggttaagacgtatggcacagagtcagacagc
aagtttaggagatcccacattgagcgtcaacatgagaatattgatgcgcttattagctgt
gtaacaaataacatcgggttcagtcatggaaagcctgttgctgcgcttaccatttacaga
tgtcttctccactggaaatcttttgaagcagaaaggactagtgtgtttgatcgtctcatt
caaatgattggttcagcaattgagaatgaagaaaacaatgaacatatggcttactggtta
tcaaatacatctactttattgtttttactgcaacgaagtataaaggcagctggtgctagt
gcaactccgcaacggaaacctccctcggcaacatccttgtttgggcggatgacaatgggt
tttcgctcatcaccatcttcttccaaccttgctgctgctgctgcactggctgtcgtgcgc
caagtagaggcaaaatatccagccttgcttttcaagcaacaacttgcagcatatgtagag
aaaatttatggaattattcgagacaacttgaagaaggagttggcatctttgctttcctta
tgcattcaggcacccaggacttccaagggaagtgtactaagatctggacggtcctttggg
aaagattctcctttaagtcactggcagagcattgttgatagtctaaacactctcctgagt
acattgaagcaaaattttgtgcctccagttcttatccagaagatctatactcaaactttc
tcatatatcaatgtgcaattgtttaacagtcttctcctacgtcgtgagtgttgcacattt
agcaatggtgaatatgtaaaatctgggttagctgagctagagctatggagtgcccaagca
aaagaagagtatgcaggttcatcttgggatgaactcaagcacataagacaggctgttgga
tttttggtcatacatcagaagtacagaatatcctacgatgaaatcacaaatgatctgtgc
cctatcttgagtgttcagcaactatatagaatatgtacgctatattgggacgacaattat
aatactcggagcgtgtcacctggtgtcatttctagcatgagggtactgatgacagaagac
tccaacagtgctgttagcaattcctttttgttggatgacaattctggcattcccttctct
gtggatgacctttctaattcactgcaagagaaagatttcatggatgttcagccggcagag
gaactactcgagaacccagccttccaattcttacacgagtaa
DBGET
integrated database retrieval system
