Populus trichocarpa (black cottonwood): 7461532
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Entry
7461532 CDS
T01077
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7461532
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7461532
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
7461532
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7461532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EZ
HEAT_EF3_N
HEAT
HEAT_2
HEAT_ECM29
TOR1L1_N
Cnd1
HEAT_DAAF5
CEP104-like_TOG
GNC1_N
Htt_N-HEAT_1
MMS19_N
PPP2R1A-like_HEAT
RIX1
Motif
Other DBs
NCBI-GeneID:
7461532
NCBI-ProteinID:
XP_024453387
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Position
3:322336..334440
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AA seq
1218 aa
AA seq
DB search
MANLQMTGILEKMTGKDKDYRYMATSDLLNELNKEGFKADADLEIKLSNIVLQQLDDVAG
DVSGLAVKCLAPLVKKVSEARVVEMTNKLCEKLLHGKDQHRDIASIALKTIVSEVTAISL
AQSILVTLSPQLIKGITSPGLNTEIKCECLDILCDVLHKFGNLMADDHEVLLNALLSQLN
SNQATIRKKTVSCIASLASSLSDDLLGKATVEVVRKLRSKGAKPEMIRTNIQMIGSLSRA
VGYRFGPHLGDTVPVLINYCTSASENDEELREYSLQALESFLLRCPRDIYSYCHEILHLT
LEYLSYDPNFTDNMEEDTDDESLEEEEEDESANEYTDDEDASWKVRRAAAKCLAALIVSR
PEVLANLYEEACPKLIDRFKEREENVKMDVFNTFIELLRQTGNVTKGQIDMDESSPRWLL
KQEVPKIVKSINRQLREKSIKTKVGAFSVLKELVVVLPDCLAEHIGSLIPGIEKALNDKS
STSNLKIEALIFTRLVLASHSPSVFHLYIKALSSPVLSAVGERYYKVTAEALRVCGELVR
VVRPNIQGFGFDFRPYVHPIYNAIMSRLTNQDQDQEVKECAISCMGLVISTFGDNLKAEL
PVCLPVLVDRMGNEITRLTAVKAFAVIAASPLLIDLSCVLENVIAELTAFLRKANRALRQ
ATLGTLNSLIVAYGDQIGSSAYEVIIVELSTLISDSDLHMAALALELCCTLMADRKSSPN
VGLAVRNKVLPQALTLINSPLLQGQALLALRNFFAALVYSANTSFDTLLDSLLSRAKPSP
QSGGVAKQALHSIAQCVAVLCLAAGDKKCSSTVDMLTDILKDDSSTNSAKQHLALLCLGE
IGRRKDLSMHANIETIIIESFQSSFEEIKSAASYALGNIAVGNLSKYLPFILDQIDNQQK
KQYLLLHSLKEVIVRQSVDKAEFQDSSVEKILKLLFNHCESDEEGVRNVVAECLGKIALI
EPAKLVPALKVRTTSPAAFTRATVVIAVKYSIVERLEKIDEIIYPEISSFLMLIKDHDRH
VRRAAVLALSTFAHNKPNLIKGLLPELLPLLYDQTIVKQELIRTVDLGPFKHIVDDGLEL
RKAAFECVDTLLDGCLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLA
VLDSLVEPLQKTVNFKPKLDAVKQEVDRNEDMIRSALRAIASLNRTSGGDCSLKFKNLMS
EISKSQTLWDKYYSIRNE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttacaaatgacgggtattctggagaagatgacgggtaaggataaagattac
agatacatggcaacgtctgatttgttgaatgagttaaacaaggagggttttaaagccgat
gctgatttggagataaagttatcaaatattgttctacagcaactcgatgatgtagctggt
gatgtttctggattggctgtgaagtgtcttgctccattggtgaagaaggtcagcgaggct
cgagttgtggagatgactaataaactatgtgaaaaattgctacatggtaaagatcagcat
cgtgacattgcaagcattgctttgaagactattgtatctgaagtcacagcaatatctctg
gctcaatctattcttgtcactctatctccacagttgataaaaggaataacaagtcctgga
ttgaacacggagataaaatgtgaatgtcttgatattttgtgtgatgttcttcataaattt
ggaaatttgatggcagatgatcatgaggtgcttttaaatgcgcttttgtcccaactgaat
tccaatcaagccaccattagaaagaagactgtttcatgcattgcatctcttgcttcaagc
ttgtcggatgatttattggggaaggcaacagttgaggtagttcggaaattgagaagtaag
ggtgcaaaacctgagatgatccgaacaaacattcaaatgattggttctttaagccgtgct
gtgggatatcgatttggaccccatcttggagacactgtgccagtgctaattaattactgc
acaagtgcatcagagaatgatgaggagcttcgtgaatatagcttgcaggctttagaaagt
tttctccttagatgccccagagacatttattcttactgtcatgaaattcttcatcttact
ctggagtacctaagttatgatccgaacttcactgataacatggaagaagatactgatgat
gagagtcttgaggaggaggaggaggatgagagtgcaaatgaatataccgatgatgaagat
gccagctggaaagttcgaagggcagctgctaaatgcttagcggcattgattgtttctcgt
cctgaggtgcttgcaaatctatatgaggaggcctgtcctaagttgattgatagatttaaa
gaaagggaagaaaatgtcaagatggatgtgttcaatacattcattgagctactacgtcaa
actggaaatgttacaaaagggcagattgacatggatgaatcaagcccaagatggttactg
aagcaagaagtgccaaagattgtcaaatctataaacaggcaattgcgtgagaaatctatc
aagaccaaggttggtgcattttcagttttgaaagaacttgtggttgtcttgccagactgc
cttgcagaacacattgggtcactaattccaggaattgagaaggcattaaatgacaaatct
tcgacctcaaatttgaagattgaggctcttatatttacaagattggtattggcttcacat
tcaccctctgttttccacctttatatcaaggccctttctagtcctgttttgtctgctgtt
ggtgagagatactacaaggtcacagcagaggcattaagagtctgtggggaacttgttcgc
gttgtccgtcccaatatccagggctttggttttgacttcagaccttatgtccatccaata
tataatgccataatgtcacgtttgaccaaccaagatcaagaccaggaggtcaaggagtgt
gccatttcttgcatggggcttgtcatttcaacatttggcgataacctcaaagcagaatta
cctgtgtgtctccctgtacttgttgatcgtatggggaatgagataacacggcttactgct
gtgaaggcttttgctgtaattgctgcttctcctcttctgattgatctgtcatgtgtcctg
gagaatgtaattgcagagctgactgcattcctacgcaaggctaatcgggctttaaggcag
gcaactttggggacactgaattctctaattgtagcttatggtgatcaaattggttcatct
gcttatgaagttattatcgtggaactttcaactctgattagtgattcagatttgcacatg
gcagctcttgccctggaactttgctgcaccttgatggctgacaggaaatcgagcccaaat
gttggtttggctgttagaaataaagttcttcctcaagcactaacattaattaacagccca
ttgctacagggtcaagcccttttggctttacgaaacttttttgctgctttagtctactct
gcaaatacaagttttgacactttactggactcgcttctttcacgtgctaagccatctcca
cagtcaggaggtgttgcaaaacaggctttgcattcaatagcccaatgcgtggctgttctc
tgccttgccgcaggtgacaaaaaatgttcatctactgtggacatgcttactgatattctc
aaagatgacagtagtaccaattcagcgaagcagcaccttgcactattatgcctgggagaa
attgggagaaggaaagatctaagcatgcatgcaaatatagaaaccattattattgagtcc
ttccaatcctcttttgaagaaataaagtctgctgcttcttatgctcttggtaatattgcc
gttggtaatctttccaagtacctaccctttatcttggaccagattgataatcaacagaag
aaacaatatctcctgcttcattctttgaaggaggttatagtaagacaatcagtagataaa
gcagagttccaggattccagtgttgagaagatacttaaattactatttaatcactgtgaa
agtgatgaagagggtgttcggaatgttgtagctgagtgccttggtaaaattgcacttatt
gaacctgcaaagctcgttcctgcgcttaaggtgagaacaacgagcccagctgccttcacc
agagcaacagtggtaattgctgtaaaatactcaatagttgagcggctagagaagattgac
gagattatatacccagaaatctcatcgtttcttatgcttatcaaagatcatgaccggcat
gttaggcgtgcagctgtcttggccttgagcacattcgctcacaataagcctaaccttatc
aagggactccttcctgaattgttgccacttctctatgatcaaacaattgttaagcaagaa
ttgatacgaactgtagatcttgggcctttcaagcatattgtggatgatggccttgagttg
aggaaagcagcctttgaatgtgtagacacattgctggatggttgtcttgatcaagtgaac
ccttcatctttcattgttccttacctcaaatcaggcctggatgatcattacgatgttaaa
atgccttgtcatcttatcctctcaaaattggccgataagtgtccatctgctgtattggca
gtgctggactcattggtggagcccctccaaaaaactgtcaattttaagcctaagctagat
gctgtgaagcaagaagtggatcgcaatgaagacatgattcgcagtgctcttcgagcaatc
gcatccttgaatcgaacaagcggaggagattgcagccttaaattcaaaaaccttatgagt
gaaatttcaaaatctcaaaccctttgggacaagtattattccatccgaaatgagtga
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