Populus trichocarpa (black cottonwood): 7461591
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Entry
7461591 CDS
T01077
Name
(RefSeq) two-component response regulator ARR14
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7461591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7461591
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
7461591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DUF1699
Motif
Other DBs
NCBI-GeneID:
7461591
NCBI-ProteinID:
XP_024445339
LinkDB
All DBs
Position
18:complement(11484383..11487792)
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AA seq
484 aa
AA seq
DB search
MAKNNDEVSEISMHDEGRGDMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAA
EALKMLRENKNDYHVVITDVKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRH
GARDYLLKPVRIQEMQNIWQHVVRKRLSDSSDKSSSFTKEIIEQESVPSTEPMAEAEVTG
VKEKEIIGNPNGDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMMNVEGL
SRENIASHLQKYRNLLKKHKDKMNQQDNAGTDLNRYGRISATKNGLWNTYGDSTPKPQSL
ASSLPEFKGLNFSASSSTWELPTEYTGSQSFGQNPGLCNLSPLLCSPAASFKPSFPMLGQ
TLIDRSPASVLSNPSYFPGQYGEGISMNLCGSGTSNFREHDSHCAYRDQKSLLEDFMNSE
EAKLFMDEEISDMVNQAIVFFRLTKWQFDISPLIMVQTCSTVRQNHNTSFSSPLQFNSDG
TPRL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaataatgatgaagtgagtgagatatcaatgcatgacgagggccgtggcgac
atgttcaatcccgcggatttgcgagttctagccattgatgctaacgttgtctgcctcaag
tatttagtagccatcctccaaaagtgtcaatacagagttacatcgacaacattagcagct
gaagctttgaagatgttgagggaaaacaagaatgattaccacgttgttattactgatgtt
aaaaggcttgacatggatggtttcaagctgttggagatcataggccttgaaatggactta
cccgtgattctggtctcggcagaggacagtcaaagcagcataatgaagggaataagacat
ggggccagagactatctcttaaaacctgtaagaatacaggaaatgcaaaatatatggcag
catgttgtaaggaagaggctctctgattcttccgataaatctagtagctttacaaaggaa
ataattgaacaagaatcagtgccttcaaccgaacccatggcagaggcagaggtcacgggg
gtcaaagagaaagaaattatcggtaacccaaatggcgatgcttgtagtggtaaaaaacca
agggtgacatggtcctccgagctccatgttaaatttgttgattgtgttgagaaactagaa
gcacgtggagagagagttcagcccaaaagaattcgtgaaatgatgaacgtggaaggtctt
agtcgagaaaacattgccagtcatcttcagaaatatcgaaacttgttgaagaagcacaag
gataaaatgaaccaacaagacaacgctgggactgatttgaataggtatggaagaatttca
gccacaaagaacggtctttggaacacttatggtgattctacaccgaagccacaatcacta
gctagttctttgccagaattcaaaggtttaaacttctcagcatctagttcaacatgggaa
ttgcctactgagtacacgggatctcagtctttcggccaaaatcctggtctttgtaatctg
tcacctcttttatgctctcctgctgcttctttcaaaccgtcctttccgatgcttggacaa
actttaattgacaggagcccagcttctgttctttctaatccgagttattttcctgggcaa
tatggtgaaggaatttctatgaatctctgtggaagtggaacttcaaactttagagagcat
gatagtcactgtgcatacagggaccaaaaatcactgctggaagacttcatgaatagcgag
gaagccaagttattcatggatgaggaaattagcgacatggtcaaccaggctatagttttc
ttcagactgacaaaatggcaatttgatattagccctttgataatggttcagacatgttca
acagtcagacaaaatcataacacatcgttttcttctcccttgcagtttaacagtgatggg
actcctaggctatga
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