Populus trichocarpa (black cottonwood): 7461606
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Entry
7461606 CDS
T01077
Name
(RefSeq) glutamate receptor 2.8 isoform X2
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7461606
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
7461606
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
P9_TM
Motif
Other DBs
NCBI-GeneID:
7461606
NCBI-ProteinID:
XP_024445715
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All DBs
Position
18:11722279..11738911
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AA seq
945 aa
AA seq
DB search
MAIPKKKFTLPFFTLLLVNLWSNQMVIMAMESIPIGVVLDLNSTVGEMAESCMSMAVSDF
YALNVDFKTRLALFTRDSSSDVVAATSSVLDLMKKQVHAIIGPQKSSQAKFVIELGGKAE
VPIVSFSATSPTLSATQSKYFVRTVQDDSSQVKAIASIVQAYGWREIVLIYEDTEYGNGL
VPLLLEAFQEIDTRVPYGSRIPLYFNDTQIMRELSKLKAMQKSIFLVHMSASLGSRLFLL
AKDAGMMSEGYAWLVTAGLSTLLDPLGSEVMDSMRGVLGIKPHVPTSKKLESFKSRWRKN
FTISKPQSKINELNLFGLWAYDTVWAIAMAVEKAGIVHSRYVKPNTSEGTVDIAALGKSE
TGPRLLSSILSTRFQGLSGDFHLAGGERVPSAFEILNLIGKAERVIGYWTPERGLSRNLY
TNGKIASSTSKNRLKEPIWPGDTTQQPKRLRIGVPLKTGFNEFIEVEWNPEDDKPIVSGF
TRDVFVSVVEALPFPLPYEFIPFVNKNKQSAGTYNDLLDQIKLKNFDAAVGDITIIANRS
TYVDFTLPFSESGITMVVLTKRDERENMWIFLKPLSLELWLTTGIAFILTGLVVWVLEHR
ENKVFRGKPAQQLGTTLWFSFSTLFFAHREKVVNNWTRFVLIIWIFVVLIISQSYTASLA
SILTVKRLQPTFVDVKEIRKNGYFVGHQKDSFVKDFLVKQLNFNDTMLREYSTPEEYHDA
LSRGTHNGGVAAIFAEIPYIKLFLAKYCSKFQMVGPTYKTDGFGFAFPLGSPLVPYISRA
ILNVTQDKDKMDEIERRNFGGETTCSDQAAMVPSGGLGLPSFGGLFIITGVASMSALLIY
VTKFLYIHWPASNTMDQERSFYLRVLELAKHFDKEDPSAHHLNGAGSRVHAVPSVEIVGA
SPDIDDARSHSRTSSEGSGDIIGDQDHDNHTPRNSAANPEPPHTP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccgaagaagaaattcaccctgccttttttcacccttctcttggttaatctc
tggtccaaccaaatggtgatcatggcaatggagagtataccaataggagtagttcttgat
ttgaactctacagttggagaaatggcagagagctgcatgtccatggcagtctccgatttc
tatgctcttaatgttgattttaaaacgagactcgctcttttcactagggattccagcagt
gatgtcgttgctgcaacttcttcagtgctggatttaatgaagaaacaagtgcatgctatc
atagggcctcaaaagtcatcgcaagctaagtttgtgatagagcttggaggaaaagcggag
gttccgattgtttctttctcagccacaagcccaactctttctgcaactcaaagcaaatat
tttgtccggacagtccaggatgattcttcacaagtgaaagcaatagccagcattgtccaa
gcttatggttggcgggagattgtactaatctatgaagacaccgaatatggaaatggtttg
gttccacttttgttagaagccttccaagagatcgacactcgagtcccttatggaagtaga
attcctttgtatttcaacgacactcaaatcatgagggagctcagcaagttgaaggcgatg
cagaagagtatatttctagtgcacatgtcagcctcccttgggtccaggctgttcttactt
gccaaggatgcaggaatgatgagcgaaggatatgcatggctcgtgacagctggattatcc
accttgttagatcctctaggttctgaagtcatggattcaatgcgaggtgtgttgggtata
aagccacatgtaccgacttcaaagaaacttgaaagttttaaatcaagatggagaaagaat
ttcaccataagcaaaccacaaagtaagatcaatgaattaaaccttttcggtttgtgggca
tatgatacagtttgggcaatagcaatggctgtagaaaaggctggtattgtgcattctaga
tacgtaaagccgaatactagtgaaggcacagttgacattgctgccttgggaaaatctgaa
acggggccaagactcctaagctccatattaagcacaagatttcaaggcctaagtggggac
ttccatttggctggtggagaaagggtaccttcagcatttgaaatactcaatttgatcgga
aaagcagagagagtcattggatattggactccagagagaggactctcacgaaacttgtat
actaatggtaaaatagcatcttcaacttccaaaaacagactgaaggagccaatttggcca
ggagacacaacccagcagccaaagaggttgaggattggggttccactgaaaactggtttt
aatgagtttatcgaagtggaatggaatcctgaagatgataaacctattgtttcaggtttc
acccgagatgttttcgtctccgtggttgaagcattaccattcccccttccgtatgagttc
attcccttcgtcaacaaaaataagcagagtgctgggacttacaatgatcttcttgaccaa
atcaaactaaagaattttgatgctgcggtgggagatataacaataattgccaatcgctca
acatatgtggattttacgttgcctttttcagaatcaggcatcacaatggtagttttgaca
aaacgtgatgagagggaaaacatgtggattttcttgaagccactaagcctggagctttgg
ttaacaactggaatagcattcatcctcactggcttagtggtgtgggtgctcgaacaccgt
gaaaacaaagtgttcaggggaaaaccagcgcagcaacttggcacaacgttgtggttctcc
ttttcaaccctcttctttgcacatagggagaaggtggtgaataactggacaagatttgta
ttgatcatatggatttttgtggtgctaatcatatcacagagttacactgctagcttagcc
tcaattttgactgtaaagcggttgcagcctacatttgttgatgtcaaagagattagaaag
aatggttactttgtaggacaccagaaggattcttttgtgaaagacttcctcgtaaaacaa
ttgaacttcaatgacaccatgttgagggaatatagcactccagaagagtatcatgatgca
ttgtctcgtggaacccacaatggtggtgtagctgctatctttgctgaaattccctacatc
aaactctttctagcaaagtattgctccaaattccaaatggtaggaccaacctacaaaacc
gatggatttggctttgcatttccccttggatccccactggtcccttacatttcaagggca
atcttgaatgtcacacaagataaagataaaatggacgaaattgaacgaaggaactttggt
ggcgaaaccacttgctcagatcaagctgccatggtaccctctggtggtcttggtttaccc
agcttcggaggcctcttcatcatcacaggagttgcttccatgtctgctcttctgatatat
gtcacgaagttcctttacattcattggcctgcttcgaacaccatggatcaagaaagatcc
ttttacttgagagttcttgaattggcaaaacattttgacaaggaagatccatcagctcat
catcttaatggagctgggtcaagagttcacgctgtaccaagtgtcgaaatagttggagct
tcacctgatatcgatgatgcacgtagccattcaaggacttccagtgaaggatctggagac
atcattggagatcaagaccatgacaatcataccccaaggaacagtgctgcaaaccccgaa
cccccacacacaccgtag
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