Populus trichocarpa (black cottonwood): 7461611
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Entry
7461611 CDS
T01077
Name
(RefSeq) cyclic nucleotide-gated ion channel 17
KO
K27629
cyclic nucleotide gated channel 17
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7461611
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7461611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7461611
Ion channels [BR:
pop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
7461611
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
7461611
NCBI-ProteinID:
XP_024446540
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Position
18:complement(11823952..11837113)
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AA seq
727 aa
AA seq
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MELKKEKLVMFYSDGKHDKEILWGKNDPIRLEKSSSVDKVSSSLLKADNMIVGGRNKLNG
NSEIGRSKVFPEDLAPWRQRILDPGSDIVLRWNKIFLFSCLMALFVDPLYFYLPTVGGAG
ESSCVNTDFKLRIVVTFFRTIADLFYWLHMLIKFRTAYVAPSSRVFGRGELVMDPKKIAR
RYIRSDFFIDLIATLPLPQIVIWFVIPATRSSRTDHKNNALALIVLLQYVPRLYLIFPLS
SEIIKATGVVTRTAWAGAAYNLLLYMLASHVLGASWYLLSIDRYTSCWKSQCRKENSPVK
CLLAYLDCDTFNDGEHKAWARGTSVFKNCDPDNDIEFKYGIFENAVKKNVVSSNFIEKYL
YCLWWGLQQLSSYGQNLSTSTFIGETSFAVLISILGLVLFAHLIGNMQTYLQSLTVRLEE
WRLKRRDTEEWMKHRQLPEDLRKRVRRFVQYKWLATRGVNEESILRGLPADLRRDIQRHL
CLDLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIVREGDPVTEMLFVIRGKLESSTT
NGGRTGFFNSIMLKPGDFCGEELLSWALHPKSSLNLPSSTRTVKALNEVEAFVLRAEDLK
FVANQFRRLHSKRLQHTFRYHSHHWRTWAACFIQAAWRRHKKRMVENNLTMSESFALNER
EATEPEEEDEAHFSDRSNPSQAKLNLGVTILASRFAANTRRGAQKIKDVEMPKLPKPEEP
DFSSDVD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaagaaggagaagcttgtaatgttttattctgatggaaaacatgacaaagaa
atcctgtggggaaaaaatgacccgatacgcttagaaaagtcatcttctgttgataaggtc
tcatcttcattgctaaaagcagacaatatgattgtgggtggtagaaataaactcaatgga
aattccgaaattggaaggtctaaggtgtttccagaggaccttgccccatggcgtcagaga
atacttgaccctggaagtgatattgtattgcgatggaacaagattttccttttctcatgc
ttgatggcactttttgttgatccgttgtatttttacttgcccactgttggaggggcaggg
gaatcttcatgtgtgaatacagactttaagttgagaattgttgtgaccttttttcggact
attgcggatcttttttattggttgcacatgcttataaagtttaggactgcttatgttgca
ccaagctctcgcgtctttggaaggggtgaactcgtcatggacccaaagaagattgcaagg
agatatattaggtctgacttcttcattgatctcattgctactctgcctctccctcagatt
gtcatatggttcgttataccagcaacaagaagctctcgaactgatcataagaacaatgcc
cttgctttaattgttctgctacaatatgttcccagattatatctcatttttccattgagc
tcagaaattattaaagcaactggagtggttaccaggacagcttgggctggggctgcatat
aatctgctactatacatgttggccagccatgttttaggggcttcatggtatttgctatca
attgataggtatacgtcatgctggaaatcacaatgtagaaaagaaaatagtcctgtcaaa
tgcttgctcgcttatctggattgtgatacttttaacgatggcgaacacaaggcctgggca
aggggtacaagtgttttcaagaactgtgatcctgataatgacatagagttcaaatatggc
atatttgaaaatgcagttaaaaaaaatgtcgtatcctccaactttattgagaagtatttg
tattgcttgtggtggggtttacagcagctaagttcatatggacagaatttgtcaactagc
acatttattggggagacatcatttgccgtactcatttcaatcttgggtcttgttttattt
gcccatttgattggcaatatgcagacatatcttcaatctctcactgtgagactggaagaa
tggagactcaagcgaagagatactgaggaatggatgaagcatcgccaactccctgaagat
ctgaggaaacgggttcgacgttttgttcaatacaagtggcttgcaactcgaggagtcaat
gaagaatccatactacgtggcctacctgctgatcttagacgtgatatccagcgccaccta
tgtttggaccttgttcgacgtgtgccctttttctcacagatggatgatcaactgcttgat
gcaatatgtgagcgtctagtttcttccctgagcactgaaggcacgtatattgttcgtgag
ggtgatcctgtgacagaaatgttatttgttattagaggcaaactggagagttccactacc
aacggtggcaggacaggtttctttaattctatcatgctgaaacctggggatttttgtgga
gaggagctactttcatgggctttgcatccaaaatcatccctcaacttgccatcatcaaca
cgaacagtcaaggctctaaatgaagttgaagcttttgtattgagagcagaagatctcaag
tttgttgccaaccaatttagacgcctccatagcaagaggctgcagcatacattccgatat
cattcacatcattggaggacatgggcagcctgcttcatacaggctgcttggcgtcggcac
aagaaaaggatggtggaaaacaatctcaccatgtcagaatcctttgcattgaatgagaga
gaggctactgaacctgaggaagaggatgaggctcatttttcagatcgttcaaatccttcc
caggcaaaactgaaccttggggtcacaatactagcttccagattcgctgccaacacaagg
agaggtgctcaaaagatcaaggatgttgagatgccaaaactaccgaagcccgaggaacct
gacttttcatctgacgttgattag
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