Populus trichocarpa (black cottonwood): 7461613
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Entry
7461613 CDS
T01077
Name
(RefSeq) probable E3 ubiquitin-protein ligase XBOS32 isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7461613
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7461613
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7461613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
7461613
NCBI-ProteinID:
XP_002325092
UniProt:
B9IM57
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All DBs
Position
18:complement(11902294..11909183)
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AA seq
509 aa
AA seq
DB search
MKFLSIMGNSLGCSASGERLVSAARDGDIQEAKALLEYNPRLARYSTFGVRNSPLHYSAA
QGHHEIVSLLLESGIDINLRNYRGQTALMQACQHGHWEVVLTLMLFKANIHRADYLNGGT
ALHLAALNGHSRCIRLLLADYIPSIADCWEILSKGSKDNESISEFDGSALREVINRPADG
GITALHMAALNGHVESVQLLLDLGASVYEVTVEDGTTIDLIGAGSTALHYAACGGNSQCC
QILIARGANLTAENANGWTPSMVACSWHRNELEEILSSQPGNRSQICPSSYLSIPFMSIV
KIARECGWRNNDSLPTCEDACVVCLERKCTVAAEGCRHEFCTRCALYLCSAICTSTVAQG
PTGSVACPLCRHGIVSFVKLPGTKPLVKAIARTSLSLSFCTCSGEEQDFTSMKTLLCKPD
FQCTRISPLSSSFRSLSCRKFPSMNFNASRCMGTSDTSPSLVPCTIDRNLRECLVRCSRS
RIRQSTSNTERRRSWLSALNQYVTTGTGC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctgagcatcatgggcaattcacttggttgttctgcctctggagaacgtttg
gtttcggctgcaagagatggggatattcaagaagctaaggctttattggaatacaatcca
aggcttgcaaggtactcaacatttggtgttcgaaattctccactccattactctgcagct
cagggtcaccatgagatagtttctctcttgcttgagtctggaattgatatcaatctgagg
aattatcgtggtcagactgctttgatgcaagcttgtcaacatggtcactgggaggttgtg
ctgactttgatgctttttaaagccaatattcacagagcagattatcttaatgggggtact
gcacttcacttggctgctttgaatggtcattctcgatgcatacgcctcctccttgcagac
tatatacctagcatagctgattgttgggagattttaagtaagggatctaaggacaatgaa
tccatctctgagtttgatggaagtgctcttcgcgaggtaatcaatagacctgctgatgga
ggcataactgctttgcatatggcagccctaaatgggcatgttgaaagcgtgcagttactc
ttggacttgggagcttccgtttatgaggtcaccgtggaagatggaactactatcgatcta
ataggtgctggaagcacggctcttcactatgctgcatgtggtggaaattcacaatgttgt
caaattttgattgccaggggtgctaatttgacggctgagaatgcaaatgggtggactcca
tcgatggttgcttgttcgtggcacagaaatgaacttgaggagattcttagctcacaacca
gggaaccggtctcaaatctgtccttcttcatatctatctattccctttatgagcattgtc
aaaattgccagagaatgtggatggaggaacaatgattccctccctacatgtgaggatgca
tgtgtggtttgtttggaaaggaagtgcacagttgctgcagaaggctgtagacatgaattt
tgcacacgatgtgcattgtatctttgttctgcgatctgtacctcaactgttgctcaaggc
ccaacagggtcagttgcctgtcctctctgccggcatggcatagtttcatttgtcaagctt
cctggaacaaagccattggttaaagctattgccagaacaagtttatctctatcattttgc
acatgttcgggtgaagaacaagatttcacttcaatgaaaaccctactctgcaagcctgat
ttccaatgcaccagaatttccccgctttcatcttcgttccgctctttaagttgccggaag
tttccgtcaatgaatttcaatgccagccgatgcatgggaacttcagatacaagtccatct
ttggttccttgtactattgatcggaacctgcgtgaatgcctagtcaggtgttcgagatca
agaattagacaatcgacttctaacacagagcgcaggaggtcttggttatctgcactcaac
cagtatgtaactacaggaactgggtgctaa
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