Populus trichocarpa (black cottonwood): 7461621
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Entry
7461621 CDS
T01077
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
7461621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7461621
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
7461621
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Paralog
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Motif
Pfam:
Aa_trans
Trp_Tyr_perm
DUF5704
Motif
Other DBs
NCBI-GeneID:
7461621
NCBI-ProteinID:
XP_002325097
UniProt:
B9IM70
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Position
18:complement(12016456..12018888)
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AA seq
395 aa
AA seq
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MENKQVSFLKTCINGINALSGIGILSIPYALSAGGWLSLILLILIAAAACFTGLLMRRCM
DRNPNVTSYSDIASHAFGRRGKLVASFFTSLELYFVATGFLIMEGDSLHKLSPNFALKLG
SLSIDGRHSFVILSGILILPTMWLSNLGVMSYVSACGVLSSLVVVVCVLCVGVTKGVGFH
GKGSLINLQGVPTALSLYAFCYGAHALFPSIYNSMRKKNQFSKVMFVSFVICTITNLSMA
VLGYLIYGQNVQSQVTLNLPTQKLSSKIAIYSILAGPIAKYALTITPIATAIESVLPDRY
QDSKSIGILVRMSLLISTVVMAMVFPSFQSLTSLSGAALIVIVSFFLPCACYLKIFKVYQ
KWGIELAGILTIMLMSVVVGAVGTYSSIAQTVKHN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaacaagtaagcttcctaaagacttgcattaatggcatcaacgctctttca
ggaattggcattctatccattccgtatgccctttcagcaggaggctggttaagcttgatc
ctgctgatcttgattgcggctgcagcctgctttactggacttctgatgcgcagatgcatg
gatagaaatcctaatgttacaagttattctgacattgccagtcatgcatttggacgcaga
ggaaaattagtagcgtctttcttcacctctttagagctttattttgtcgccactggtttt
ttaataatggaaggggacagcttgcataagctttctccgaactttgcattaaagctggga
agcctttctatagatggcaggcattcttttgttattctttcaggtattttgatcttgcct
actatgtggctaagtaacctcggtgttatgtcctatgtttcggcctgcggggtgctgtct
tctctggttgtagttgtttgtgttttgtgtgttggtgtgactaaaggggttggatttcat
ggcaaaggatcactgataaatttacaaggggtgcctactgcactcagtttgtacgctttt
tgctatggtgctcatgcattgttccctagcatatacaattcaatgagaaagaaaaaccag
ttttccaaggtcatgtttgtaagttttgtcatatgtactatcaccaacttatctatggcc
gtattgggctatcttatatatggtcagaatgtgcaatctcaagttacattaaatctacct
acgcaaaagctcagctccaagatagcaatatacagcatattggcaggtccaattgccaag
tatgcattaacaataacaccgattgccactgcaattgaaagtgttttgccagacaggtat
caagatagtaagtcgataggtattcttgtcagaatgtctttgttaattagcacagtagtt
atggccatggtatttccatcttttcagtccttgacatctctaagtggagcggctctcatc
gttattgtttcattcttcctcccatgtgcatgttacttgaagatttttaaagtatatcag
aaatggggaattgagctagcaggtatcttgacaataatgctaatgtcagttgttgttggt
gctgtgggcacatattcatctattgctcagactgtgaagcataattaa
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