Populus trichocarpa (black cottonwood): 7461639
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Entry
7461639 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-5
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7461639
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7461639
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DivIC
DUF3450
APG6_N
TMF_TATA_bd
Herpes_US8A
Rab11-FIP3
AAA_23
Motif
Other DBs
NCBI-GeneID:
7461639
NCBI-ProteinID:
XP_002298675
UniProt:
B9GFJ0
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Position
1:complement(33071147..33074200)
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AA seq
490 aa
AA seq
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MEAGPSSATSGSGGGGGGGPAPFLVKTYDMVDDSSTDEIVSWSSNKNSFVVWNPPEFARL
LLPTFFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDQKHLLKNIYRRKPIHSHSQ
PQGSLVDPERAAYEEEIEKLARDKAKLKASILGFEQQRSSAKLQVEDLTQKIDTMQQRQE
KLLSFLEKAVQNPTFVEHLARKIEAMDFSAYSKKRRLPQVDHPMPIAENSLVENHSSSRP
ESNVIHQDFPDKLRLELSPAVSDINLVSHSTQSSNEDGGSPQRKISEGNPKDALTRTSGL
LLAPETLELSDTGASYAFKVNPAVPRDIPANGSPALHSLQSNLTSNEEVDGHISCQLNLS
LASSPLQVNKNPYLTRIPQLGQEIGKSPESRFNESNKDSDIRVSQNNMNLGNEVRALSNS
QETPNNNQAPASAPVRVNDVFWEQFLTERPGYSDNEEASSNYRANPYDERERRIGFGVPR
NAKNMEQLSL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaggaccatcgtcagcgacctcaggaagtggtggtggtggtggaggaggaccg
gcgccgttcttggtaaagacatatgacatggtggatgattcatcgaccgacgagatcgtg
tcttggagttcgaataaaaacagctttgttgtttggaaccctccagaattcgccagattg
ttgctccctacctttttcaagcacaataatttctctagctttatcagacaattaaatacc
tatggatttagaaagattgatcctgagagatgggaatttgccaatgaagattttgtgaaa
gatcaaaagcacctgcttaagaatatctaccgaagaaaaccaatccacagtcatagtcaa
cctcaaggttctttagtggatccagaaagagcagcatatgaggaagaaatagaaaagctt
gcacgtgataaagctaaactcaaggcaagtattctagggtttgaacagcagcggtcatct
gcaaagctacaggtggaagatctaacacagaagatagatactatgcagcagaggcaggaa
aagctgctgtcgttcttagagaaggctgttcaaaaccctacttttgttgaacaccttgct
cgtaagattgaagctatggatttttcagcctatagcaagaagagacgattgccccaagtt
gatcacccaatgccaattgcagaaaatagtcttgtggaaaatcacagtagttctagacct
gagtcgaatgtcatccatcaagatttcccagataagttgagactggaattgtcaccagct
gtttcagatattaatttggtttcacacagcacacagagctccaatgaagatgggggaagc
ccacaaagaaaaatatctgaagggaatccaaaagatgcactgactaggacatcaggttta
ctattggcacctgaaacattggaactttcagacacaggggcatcgtatgcatttaaagtg
aatccagctgtcccaagagacataccagcaaatgggagcccagcactacattcactgcag
tcgaatttgacttctaatgaagaagttgatggtcacatttcctgtcagctaaatcttagt
ctggcatcttctcctttgcaagtcaacaaaaatccttatttaactaggatacctcaacta
ggccaggaaattggcaaatctccagaatcaaggtttaatgagagtaacaaagattctgat
atccgagttagtcagaacaacatgaatctgggtaacgaggtcagagctttatccaattcc
caggaaaccccaaataacaatcaagcacctgcatcagctccagttagagtgaatgatgtt
ttctgggaacagttcctaactgaaaggcccggctattctgataatgaagaggcaagttct
aattacagagcaaacccatatgatgagcgagaaagaaggataggtttcggagtgccaaga
aatgctaaaaacatggagcagctctctctgtga
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