Populus trichocarpa (black cottonwood): 7461640
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Entry
7461640 CDS
T01077
Name
(RefSeq) serine hydroxymethyltransferase 4
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00260
Glycine, serine and threonine metabolism
pop00460
Cyanoamino acid metabolism
pop00630
Glyoxylate and dicarboxylate metabolism
pop00670
One carbon pool by folate
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01230
Biosynthesis of amino acids
pop01240
Biosynthesis of cofactors
Module
pop_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
7461640
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
7461640
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
7461640
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
7461640
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
7461640
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Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
7461640
NCBI-ProteinID:
XP_002298678
UniProt:
A9P855
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Position
1:complement(33012800..33015974)
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AA seq
471 aa
AA seq
DB search
MDPVTAWGNTSLESVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGMPGNRYYGGNEYIDQIENLCRSRALEAFHLDPTKWGVNVQPYSGSPANFAAYTAVLQP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSQSGYIDYDKLEEKALDF
RPKLIICGGSAYPRDWDYKKFRSVADKCGALLLCDMAHISGLVAAQEAANPFEYCDIVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALA
VALKQVQTPGFKAYAKQVKANAVALGNYLMGQGYKLVTEGTENHLVLWDLRPLGLTGNKV
EKLCDLANITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEQIGEFLHRAVTITL
SIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFSGSFDMPGFQMSEMKYKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatccagtcactgcatggggaaacacctccctggaatcagtggacccagaaatccac
gacttgatcgagaaggaaaaacgccggcaatgcagaggtatcgagctcatcgcttcagaa
aatttcacatctttcgccgttatagaggcccttggcagcgctctgactaataagtactca
gagggtatgccaggaaaccgctactacggcgggaatgaatatattgatcagattgaaaat
ctctgcagatctcgggctcttgaagcttttcatttagaccccacaaaatggggtgtaaat
gttcagccatattcaggttctcctgcaaattttgctgcttatacagcagttcttcagccc
catgacagaatcatggggttggatttgccttctggagggcatttgactcatgggtattac
acatctgggggcaagaagatttcagctaccagtatttattttgagagtttgccttacaag
gtgaattcgcaaagtgggtatattgattatgataaattggaggagaaggctctagatttt
aggcctaagcttattatttgtggtggaagtgcttatccgagagattgggattataaaaag
tttagatctgtcgctgataagtgtggtgctcttttgctttgtgatatggctcacatcagt
ggccttgttgctgctcaggaagctgccaacccctttgagtactgtgacatagtcaccacc
actacccacaaaagtttgaggggtcctagggctggtatgatcttctatcgcaagggccct
aaaccaccaaagaagggtcagccagagaatgcggtttatgacttcgaagacaagatcaac
tttgctgttttcccatctcttcagggcggtccccacaatcaccagatcggtgctctggct
gttgccttgaaacaggtccaaacccctgggttcaaggcctatgccaaacaagtcaaggca
aatgccgttgcccttggaaactacttgatgggccagggatacaagcttgttactgaagga
actgagaaccacctcgttctgtgggatcttagaccccttggattgacaggcaacaaggtc
gaaaagctctgtgaccttgcaaacatcaccgtcaacaaaaatgccgtgtttggtgacagc
agtgctttggctccgggaggagtaagaattggtacccccgccatgacttcaagaggtttg
gtagagaaggatttcgaacagattggagagttcctccaccgtgctgtgaccatcacgctg
agcatccaaaaggaatatggaaagctcttgaaggacttcaacaagggtctggtgaacaac
aaggacattgaggcactcaaggctgatgttgaaaagttttctggctccttcgacatgcct
gggtttcagatgtctgagatgaagtacaaggattag
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