Populus trichocarpa (black cottonwood): 7461662
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Entry
7461662 CDS
T01077
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
7461662
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7461662
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7461662
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
7461662
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
7461662
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
7461662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
7461662
NCBI-ProteinID:
XP_024444517
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All DBs
Position
1:32627673..32632099
Genome browser
AA seq
1007 aa
AA seq
DB search
MGKRANKKKTRPLQKEKRVAGHSPKSVPQQTNLNVEDVDGVTVVKERKLCPHFDKGFDAN
KLSEKISSSDSFRCEDCREAVGDRKGAKGKGKQVKKKGSGSVDSKSESKAIWVCLECGHL
ACGGIGLPTTSQSHAVRHSKQNRHPLVFQWENPQLRWCFPCNTLIPAEKTGENGEKKDAV
FEVVNMIKAQSSKESSADVEDVWFGRGSIISELNAEGTMTIGLEGRSGHVVRGLVNLGNT
CFFNSVMQNLLAMNKLHDHFSSEEASFGPLSSSLKKLFTDLKAETGFRNVINPKSFFGSV
CSKAPQFRGYQQQDSHELLHCLLDGLSTEELTVRKRRNASEEDGIPPKHGPTFVDSAFGG
LISSTVCCVECGHSSTVHEPFLDLSLPVPTKKPPTKKVQPVSQAKKTKLPPKRGGKVQPK
INRNTDSMPAQSVSKPSVQSDSPCQTQSAVPLTENTVASSDNIPAPGSTAPTTAVDERGE
VSQNLAAVIESDSKQAVETTMEQIASSFDDFWMDYIGAETTSEHDFAKENNVLAAGQQCG
DKVNIPNDDLTETCQASSIDGEPNKKPESSSVNPWEEEVPLQVQSSEVLLLPYKEEGFTD
REIMKGESEAGSSFVGCGQDEAEFDGIGDLFNEPEVSAAPVAGPSLGNEVALPSFIAGIS
SESDPDEVDDSDSPVSLESCLALFIKPELLSNDNAWECENCSNILREQRLDAKNKQSKIS
PKASINGDETQIQSDSVSLDKNISCSTEVGSFEDGDAIPNNLCNSTPEVFVSGNGCSNKK
FIHAEIVQTEMEPFISQSEERKYEMNVSHSSGCYESCNRETLSGPPVDSCSVDETSSTGY
TMAKDEQTDCNFPGNCESDVNEDGDKTLKKLNVKRDATKRVLIDKAPPILTVHLKRFSQD
ARGRLSKLNGHVNFRDVLDLRPYMDPRCVDTQSYVYRLLGVVEHSGTMRGGHYIAYVRGD
ARGKGRADKEQGGSVWYYASDAHVQEVSLEEVLRCDAYLLFYEKISN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagggctaataagaaaaagactcggccactgcagaaagagaagcgggttgct
ggccattctcccaagagtgtgcctcaacaaacaaatctcaatgttgaagatgttgatggg
gttacagtagtgaaagagagaaaattgtgtcctcactttgacaagggttttgatgcaaac
aaattgtcagagaaaattagttcttcggattcttttaggtgtgaggattgtcgagaagct
gttggtgataggaagggggctaaggggaagggtaaacaagttaagaagaaaggaagtggt
tcggttgattcaaagtcagagtcaaaagccatttgggtttgtttagaatgtgggcattta
gcatgtggaggaattggcttgccaacaacttctcagagccatgcagttcgtcattccaag
cagaaccgtcatcctttggtcttccaatgggaaaaccctcaacttcgatggtgcttcccg
tgcaatactctaattcctgctgagaaaacaggggaaaatggtgagaaaaaagatgcagtg
tttgaggttgtaaatatgatcaaggcgcaatcgtctaaagagtcatcggcggatgttgag
gatgtgtggtttggaagaggcagtattattagtgaacttaatgcagaaggcaccatgaca
attggcttagagggaagaagtggtcatgtggtgagaggcttggttaatcttgggaacact
tgcttctttaattcagtcatgcagaatcttctagctatgaacaagttgcatgaccacttc
tcaagtgaagaggcatcttttggacctttatcaagttctttaaagaagctattcactgat
ctaaaagctgagactggttttaggaatgtaatcaatccgaaatccttttttgggtcagtc
tgttccaaggctccccaatttagggggtatcagcagcaagatagtcatgaattgctgcac
tgcttacttgatgggctgtctactgaagagttgactgttagaaagcgaagaaatgcttct
gaggaagatggcattcctccaaaacatggtcctacatttgtggattctgcttttgggggg
ctgatttctagcactgtttgttgtgtagaatgcgggcactcctcaaccgtgcatgagccg
tttctagatctctcacttccagttccaactaagaaacctccaactaaaaaagtccaaccg
gtctctcaagcaaagaaaacgaagctgcctccaaagagagggggaaaggttcagcctaag
attaacagaaatacagattcaatgccagctcaaagtgtttcaaaaccatcagtccagagt
gattctccatgccaaacacagtcagctgtgcctctcacagaaaacacagtagcttcttca
gataacattccagcaccaggttccactgccccaactactgcggtcgatgaaaggggcgaa
gtttcacagaatttggctgctgttattgaatctgatagtaagcaagctgttgagactaca
atggagcaaatagcaagttcatttgatgacttctggatggattatattggagcagaaact
acatcagagcatgattttgctaaagaaaacaatgttcttgcagcaggtcagcaatgtgga
gacaaagttaatattcccaatgatgacttgacagagacttgccaggcttcttcaattgat
ggggagccaaataaaaaaccagaatcttcttctgtcaatccttgggaagaggaggttcca
ttacaggttcaaagctcggaagttcttttgcttccatacaaagaagagggctttactgac
agggagattatgaaaggggaatctgaggctggctcatcttttgtgggctgcggacaagat
gaagcggaatttgatggcattggtgacttgttcaatgagcctgaggtttctgcagcacct
gttgcagggccctcattaggtaatgaggttgctttaccaagttttattgcaggaattagc
agtgagtctgatccggatgaagttgatgattctgattctccagtgtctttagagagttgt
ttggccctttttataaagccagaacttctctcaaatgataatgcttgggaatgtgagaac
tgttcaaatatcctgcgagagcaaaggttggatgcaaagaacaagcaatctaaaatatct
ccaaaagcttcaataaatggagatgagactcaaatacaaagtgattcagtgagtttagac
aagaacatctcatgctccacggaggtcggaagctttgaggatggagatgcgatccctaat
aacctttgcaactccacacctgaagtctttgtttcaggtaatggctgctcaaataagaaa
ttcatacatgctgaaattgttcagacagagatggaaccatttatttctcaaagtgaagaa
aggaaatatgagatgaatgtatcgcatagttctggttgctatgaatcatgtaatcgagaa
actttgagtggtccacctgttgattcttgtagtgttgatgagacaagcagtactggatat
accatggctaaagatgagcagactgactgcaacttccctggcaattgtgaatcagatgta
aatgaagatggggataaaactttaaaaaaactgaatgtaaagagggatgcaactaagagg
gtccttattgataaagcaccacctattctaacggttcatttgaagaggttcagtcaagat
gctcgtggtcgtttaagtaaattgaatggccatgttaacttccgagatgtacttgatctt
agaccttatatggatcccaggtgtgttgacacacagagttacgtgtatcgactgcttggg
gtggtggagcattcaggaacaatgaggggaggtcactacattgcatatgtcaggggagat
gcgaggggcaaaggcagggctgacaaagaacaagggggttctgtgtggtattacgccagt
gacgcccatgtgcaagaggtttctctggaagaagttcttcgttgcgatgcttatttatta
ttttatgagaaaatatcaaattga
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