Populus trichocarpa (black cottonwood): 7461668
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Entry
7461668 CDS
T01077
Name
(RefSeq) transcription factor FAMA isoform X2
KO
K26213
transcription factor FAMA
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7461668
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
7461668
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
IPK
Motif
Other DBs
NCBI-GeneID:
7461668
NCBI-ProteinID:
XP_002300174
UniProt:
B9GFX7
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Position
1:32525224..32528536
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AA seq
409 aa
AA seq
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MDKEENYSGSFTELDYSLDHHHQQQDHLGLMKQRIGGTSGDDDCNNGMIDYMLNNPQQHQ
QQMSSGFCTSTSFDKLSFADVMQFADFGPKLALNQNKISEEETGIDPVYFLKFPVLNDKI
EEQSIRVPQLGGENIEEMFTGVSSGENRAGMVGEERGIGEDEEARISDNNSVQLQFLGDQ
DLQNKNPIPEAKNKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSY
VQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLMDDSSLAIQQPAQPAFFSPMPLPND
QMKLVDFETGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKAIAALEDLQLN
ILHTNITTIDQTVLYSFNVKIASDSGFTAEDIASSVQQIFNFIHANSSI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaagagaattactcgggaagttttactgagctagattactctctagatcat
catcatcaacaacaagaccaccttggactcatgaagcagcggataggtggaacttctggt
gatgatgattgcaacaacgggatgattgattatatgctcaataatcctcaacaacatcaa
caacaaatgtcatccgggttttgcacttctacttctttcgataaattgagctttgctgat
gtgatgcaatttgcagattttgggcctaagttggccttaaatcaaaacaagatatcggag
gaagaaactgggattgatccggtttacttccttaagtttcctgttttgaatgataagatt
gaggaacaatctataagggttcctcaactaggtggagaaaatattgaagaaatgtttaca
ggagtgagtagtggggagaatagggcaggaatggtgggggaagagaggggtattggagaa
gatgaagaagctaggatttcggataacaactcggtgcaacttcagtttcttggagatcaa
gatcttcaaaacaagaaccctataccagaggcgaagaacaagagaaaaaggccaagaact
atcaagacaagtgaggaagttgagagccaaagaatgactcatattgcagttgaaagaaat
cgaagaaagcaaatgaatgagcatcttcgagtcttgaggtctctcatgccaggatcatat
gtgcaacggggagatcaagcttcgataattggtggagccatagagtttgtgagagaattg
gagcaactacttcagtgcctagaatcccagaaacggcgaagactgatggatgattcctct
cttgcaatccaacaaccagctcagcctgcattcttttctcctatgcctctaccaaatgat
caaatgaagctcgtggacttcgagaccggactccgtgaagaaacagctgaaaacaagtct
tgcttggctgatgttgaagtaaagcttttagggtttgatgccatgatcaagatcctgtct
aggagaaggccaggccagctcattaaggccattgcagcactagaagatttgcagcttaac
atactccacaccaacatcaccaccattgatcaaactgttctctattcatttaatgtcaaa
attgcaagtgactctgggtttacagcagaagatatagcaagctcagttcaacagatattc
aatttcatccatgcaaatagcagcatttga
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