Populus trichocarpa (black cottonwood): 7461698
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Entry
7461698 CDS
T01077
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7461698
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7461698
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
7461698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
FANCL_C
zf-RING_UBOX
Pus10_C
zf_RING_Vps8_fungal
CoV_E
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
7461698
NCBI-ProteinID:
XP_002298708
UniProt:
B9GGD5
LinkDB
All DBs
Position
1:complement(32029898..32031025)
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AA seq
220 aa
AA seq
DB search
MSTTFSTSPLLFQQFLGDFHPRKLLLHNPLSQPSSIASPSPSGNIQDPLNPNANGDKHFD
INVVMVLIVLICALLVSLGLNSFIRCAVRCSYLNGNSSNRGIKKKALRTFPIENYSPEKS
KLPGLDTQCVICISEFVHGDRVRILPKCSHGFHVKCIDEWLSSHSSCPTCRHCLMETCQK
IAGVSQASSSEQPPSVAQERVVNIAPLEREGLVCNYREAS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccacgttttctacatcccctctactcttccaacaatttcttggggattttcac
ccaagaaaactgttactacacaaccctctttcccaaccatcttccattgcatctccttca
ccttctggtaacatccaagatccattgaatcctaatgccaatggcgataagcacttcgat
ataaatgttgttatggtcctcatagtcctaatatgtgcactccttgtttcacttggacta
aattctttcataaggtgtgcagtaaggtgctcatatttaaatggaaattcttccaataga
gggatcaagaaaaaagccttgagaacttttcctatagagaattactccccagagaagagt
aaattgccagggctggacacacaatgtgtcatatgcatatcagagtttgtacatggtgat
cgagttcgaattttgcccaagtgtagccatggatttcatgtgaagtgcattgatgagtgg
cttagctcacactcatcttgccctacatgcaggcactgccttatggagacgtgccaaaag
attgctggtgttagtcaggctagctcatcggaacaaccaccttctgtagcgcaagaaaga
gttgtgaacattgcacccctagagcgtgaaggtttggtctgcaattacagggaagccagc
taa
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