Populus trichocarpa (black cottonwood): 7461706
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Entry
7461706 CDS
T01077
Name
(RefSeq) Golgi SNAP receptor complex member 1-2
KO
K08495
golgi SNAP receptor complex member 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7461706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7461706
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
7461706
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF724
HEF_HK
CA109-like
Imm3
Motif
Other DBs
NCBI-GeneID:
7461706
NCBI-ProteinID:
XP_002302525
UniProt:
B9GPD6
LinkDB
All DBs
Position
2:complement(10961183..10965452)
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AA seq
240 aa
AA seq
DB search
MTDPNLELQESGWEELRREARKIEGDLDVKLSSYAKLGARFTTQGGGYVEGGSPRVGSSR
SWKSMEMEIQSSLEKLLDINDAMSRCAAASAATSVTQKLARHRDILHEFTQEFRRIKGNI
NSMREHAELLSSVRDDISEYKASGSMSPRVHLLRERAAIHGSIAHIDDVINQAQTTRAVL
GSQRTFFGDVQGKVKVLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaaatctagagttacaagaatcaggttgggaagaacttagaagagaagca
agaaagatcgaaggagatctcgatgtcaaactctcttcttatgctaaacttggtgctcga
tttactactcaaggaggaggttatgtggaaggtggttcgccaagagttggatccagtagg
tcatggaaatcaatggaaatggaaattcaatcttcacttgagaagttacttgatataaat
gatgctatgagtagatgtgctgctgcgtccgctgctacttcagttactcagaagctagca
aggcatagagatatacttcatgagtttacgcaggagtttagacgaatcaagggaaacata
aactcaatgagggaacatgctgagcttctgagttctgtcagagatgatattagtgagtac
aaggcttctggtagcatgtctccaagagtgcatttactacgagaaagagcagccatccac
ggaagcattgctcatatagatgatgttattaatcaagctcaaacgaccagggctgttttg
ggttctcaaaggactttttttggagatgttcaagggaaagtgaaggttctaagtgacaaa
ttcccgattatccgtggccttcttggttctataaggaggcggcgatcgagagacacgctc
attctgtctgcagtcattgctgcttgtacattgtttcttattatctactggctttcaaaa
taa
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