Populus trichocarpa (black cottonwood): 7461842
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Entry
7461842 CDS
T01077
Name
(RefSeq) MADS-box transcription factor 23 isoform X2
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7461842
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7461842
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GFIT
Motif
Pfam:
K-box
SRF-TF
HAUS6_N
CTX_RstB
Motif
Other DBs
NCBI-GeneID:
7461842
NCBI-ProteinID:
XP_002302361
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Position
2:complement(8173150..8194214)
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AA seq
224 aa
AA seq
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MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFSST
SMKSVIERYNKSKDEHHQMGNPTSEVKFWQREAAVLRQQLQTLQENHRQMMGEQLSGLSI
TDLQNLESQLEMSLQGVRMKKDQILMDQIQELNRKGNLIHQENVELYQKVYGTRDVNRAN
RNSLLTNGLAIGEESHVPVHLQLSQPQQQNHDTPATKLGRLQLH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggggagggggaagatagtgataagaaggattgataactcgacaagcaggcaagtgacc
ttctcaaagaggaggaatggattgttgaagaaagcgaaagaactggcgatcctttgcgac
gcagaagttggagtcatgatcttctctagcaccggcaagctctatgatttctccagcacc
agcatgaaatcagtcattgaaagatacaacaaatcaaaagacgagcatcatcaaatgggc
aacccaacctctgaagtcaagttctggcaaagggaggcagcagtgttgagacagcaactg
caaaccttgcaagaaaatcatcggcaaatgatgggtgaacaactttctggcttaagcata
acagatttgcagaatttggagagccaattggaaatgagtcttcagggtgttcgcatgaaa
aaggaccaaattttaatggatcaaatacaagaactaaatagaaagggcaacctcattcac
caagaaaatgttgaactctatcagaaggtctatggaacaagggacgtaaacagagcaaac
agaaattcccttctcacaaatggtctggccatcggagaggaatcacatgtacctgtccat
ctccagcttagccagccacaacaacaaaaccatgatacaccagctacaaagttgggcaga
ctacaactgcattag
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