Populus trichocarpa (black cottonwood): 7461944
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Entry
7461944 CDS
T01077
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
pop04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7461944
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7461944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7461944
Membrane trafficking [BR:
pop04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
7461944
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
7461944
NCBI-ProteinID:
XP_002304234
UniProt:
B9GXQ0
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Position
3:complement(9696763..9700903)
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AA seq
218 aa
AA seq
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MVKLTMIARVTDGLPLAEGLDDGRDVKDAEMYKQQVKALFKNLASGHNDASRMSIETGPY
IFHYIIEGRICYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPQIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRV
YADKARDLNRQALIRKWAPVAIVLGVVFLLFWIKTKLW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacaatgattgctcgtgttacggatggtcttccgctagcagagggactg
gatgatggtcgtgatgtgaaagatgctgaaatgtacaaacagcaggtcaaggcacttttc
aagaaccttgcatctggccacaatgatgcttcgaggatgtcaattgaaactggcccttat
attttccattatattattgaaggacgtatttgttacctcactatgtgcgaccgttcttat
cctaagaagcttgcctttcaatacctagaagaccttaagaatgaatttgagcgtgtcaat
gggcctcaaattgaaactgctgctagaccatatgccttcattaaatttgatacttttata
cagaaaacaaaaaaattgtaccaggacacccgcacccaacggaatattgctaagttgaat
gatgagctgtatgaagtccaccaaataatgactcgcaatgtgcaggaagttctgggtgtt
ggtgaaaagctggaccaggtcagtcaaatgtcaagccggttaacatcagaatcccgcgta
tatgctgacaaggcaagagatttgaatcgacaggccttaattcgaaagtgggcccctgtt
gccattgtgctaggagttgtcttcctcctcttttggattaaaacaaagctctggtga
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