Populus trichocarpa (black cottonwood): 7461996
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Entry
7461996 CDS
T01077
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7461996
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
7461996
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GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
7461996
NCBI-ProteinID:
XP_002303373
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All DBs
Position
3:10861730..10865922
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AA seq
365 aa
AA seq
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MATANPFDILGDDDNNEDLSQLVAAAQLKAAEKPKKVEKPAAPTSQPAKLPSRPAPPAQA
VREAKNEGGRGGGRGEGRGYGRGRGRGGSGGFNRDSNNNETSFTGNGFSGRSRPSEDGEA
AERRGYGAPRGGFRGSRRGGYSNGEDGEGERPRRMYERHSGTGRGNEIKREGSGRGNWGT
PTDEIALETEDPVVDNEKNVITEKQQGEEDAADANKDTAEKPEEKEPEEKEMTLEEYEKV
LEEKRKALLDLKTEERKVGLDKDLQCMQQLSSKKSNDEIFIKLGSEKDKRKDAADKEDRA
KKAVSINEFLKPAEGERSYNSGRGGRGRGRGRGGYGSGSGYGSNARDVAAPSIEDPGQFP
SLGGK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcgaacccttttgatatccttggtgatgacgacaacaatgaggacctttct
cagctcgttgccgccgctcagcttaaggcagctgagaagcccaagaaggttgaaaagcca
gctgctcctacttctcagcctgccaagctcccctccaggcctgctccccctgctcaagct
gtgagggaagcaaagaatgaaggtggccgtggaggaggccgtggagaaggacgtgggtat
gggcgtgggcgtggtcgcggtggcagtggtggatttaacagagattcaaataacaatgaa
acttccttcactggcaatggattctctggacgatccagaccatctgaagatggggaggct
gccgagagacgcggatatggtgcacctcgtggtggtttccgtggcagtcgccgtggcggt
tatagcaacggggaagatggagaaggtgaacgccctcgaaggatgtatgaacggcacagc
ggcactggtcgcgggaatgagattaagcgtgaagggtctggccgtggtaactggggaact
cctactgatgaaattgctctggagactgaagatcctgttgttgacaatgagaagaatgtt
ataactgagaagcagcaaggagaggaggatgctgcagatgccaataaggacactgctgag
aagccagaagagaaggagccagaagagaaggagatgacattagaagagtatgagaaggtt
cttgaagaaaaaaggaaggctctgcttgatctgaagaccgaggagaggaaagttggcttg
gacaaagacttgcagtgcatgcaacagctctcgagtaagaagagcaacgatgaaatcttt
atcaaactgggttctgagaaggacaaacgaaaagatgctgcagacaaagaagacagagcc
aagaaggctgtcagtataaatgagttcctgaagcctgctgaaggggagaggtcctacaat
tctggtcgtggtggtcgaggccgtggccgtggaaggggtggatatggaagcggaagcgga
tatggaagcaatgctcgtgatgtggcagccccctctattgaagaccctgggcagttcccc
tccttgggtggcaagtga
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