Populus trichocarpa (black cottonwood): 7461998
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Entry
7461998 CDS
T01077
Name
(RefSeq) GTP-binding protein YPTM2
KO
K07874
Ras-related protein Rab-1A
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7461998
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7461998
04031 GTP-binding proteins [BR:
pop04031
]
7461998
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
7461998
Autophagy
Other autophagy associated proteins
7461998
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7461998
Exosomal proteins of other body fluids (saliva and urine)
7461998
Exosomal proteins of colorectal cancer cells
7461998
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
7461998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
SRPRB
Gtr1_RagA
FeoB_N
LANC_like
Septin
AAA_29
ABC_tran
AAA_16
Dioxygenase_N
AAA_22
AAA_5
AAA_7
TniB
Motif
Other DBs
NCBI-GeneID:
7461998
NCBI-ProteinID:
XP_002304305
UniProt:
A9PEC2
LinkDB
All DBs
Position
3:complement(10871646..10874107)
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMN
NARPPTVQIRGQPVNQKSGCCSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgaatacgactatttgtttaagcttttgcttattggagattctggtgttgga
aaatcatgtctacttttgaggtttgctgatgattcatatctggagagttacatcagtacc
atcggagtggactttaaaatccgcactgtggaacaggatgggaaaaccattaaactacaa
atttgggacacagctggtcaagagcgttttaggacaatcacaagcagttattatcgtgga
gctcatggaatcattgttgtgtacgatgtcacagaccaagagagcttcaacaatgttaaa
caatggctgaatgaaattgaccgttatgcaagtgaaaatgtgaacaagcttctagttggg
aacaagtgcgacctcactgctaacaaagtcgtctcgtatgagacagcaaaggcttttgct
gatgaaattgggatccctttcatggagacaagtgcaaaaaatgccactaatgttgagcag
gctttcatggctatggctgcagagatcaagaacaggatggcaagccagccggccatgaac
aacgcaaggcccccaacagtgcagattcgaggacagcctgtcaaccagaagtctggttgc
tgctcctcttag
DBGET
integrated database retrieval system
