Populus trichocarpa (black cottonwood): 7462034
Help
Entry
7462034 CDS
T01077
Name
(RefSeq) stromal processing peptidase, chloroplastic-like
KO
K25894
stromal processing peptidase, chloroplastic [EC:3.4.24.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7462034
Peptidases and inhibitors [BR:
pop01002
]
Metallo peptidases
Family M16: pitrilysin family
7462034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M16_C
Peptidase_M16
PqqF-like_C_4
Motif
Other DBs
NCBI-GeneID:
7462034
NCBI-ProteinID:
XP_052302778
LinkDB
All DBs
Position
14:10257898..10275707
Genome browser
AA seq
1279 aa
AA seq
DB search
MAATAASSSVLMMNVPQTRAPLTPPKDDTLSRKNRINLIQPRRFPLIRFHSNHHQSWNSV
SSKRWSHEIATGGSGSLRKKNNAWKQCSSSLGERVVGAYFPEQFKCMSCSLNRLRSRYSI
KGSTPTIPRAFVDKSAFNLSGHSLDTASVKHVHVPCTSMGPNEPHAASIGCPDGILERQD
SDLLDSELERARLFEFLHSELPCHPKLHRGQLKNGLRYLILPNKVPPNRFEAHMEVHAGS
IDEEDDEQGIAHMIEHVAFLGSKKREKLLGTGARSNAYTDFHHTVFHIHSPTSTKDADGD
LLPSVLDALNEIAFHPSFLASRVEKERRAILSELQMMNTIEYRVDCQLLQHLHSENKLSK
RFPIGLEEQIKKWDADKIRKFHERWYFPANATLYIVGDIDNISKTVHQIENVFGQTGLET
ETVSAPSPSAFGAMASFLVPKLSVGLPGSSSREKSSISLDQSKIIKKERHAVRPPVEHYW
SLPGSNANLKPPQIFQHEFLQNFSINMFCKIPVSKVQTYGDLRNVLMKRIFLSALHFRIN
TRYKSSNPPFTSVELDHSDSGREGCTVTTLTVTAEPKNWQNAIKVAVQEVRRLKEFGVTK
GELNRYMDALLKDSEHLAAMIDNVSSVDNLEFIMESDALGHTVMDQRQGHESLFGVAGTV
TLEEVNSIGAKLLEFISDFGKPTAPIPAAIVACVPSKVYFDGLGETEFKISSSEIIAAIK
SGLEEAIEAEPELEVPKELITSTQLEELRLQLTPSFIPLVPDADYTKLHDPETGITQCRL
SNGIAVNYKISKSESRGGVMRLIVGGGRAAESSESKGAVVVGVRTLSEGGRVGNFSREQV
ELFCVNHLINCSLESTEEFICMEFRFTLRDNGMRAAFELLHMVLEHSVWLDDALDRARQL
YLSYYRSIPKSLERATAHKLMTAMLNGDERFIEPTPQSLQNLTLKSVKDAVMNQFVGGNM
EVSIVGDFSEEEIESCIIDYLGTVRATRDSDREQEFNPVMFRPSPSDLQFQQVFLKDTDE
RACAYIAGPAPNRWGFTVDGKDLFESTSGISVTADTQPNSDPQQIDRKDVQKDKQGKLRS
HPLFFGITMGLLAEIINSRLFTTVRDSLGLTYDVSFELSLFDRLKLGWYVVSVTSTPGKV
HKAVDACKSVLRGLHSNKVAQRELDRAKRTLLMRHETEIKSNAYWLGLLAHLQASSVPRK
DVSCIKDLTSLYEAATIEDIYVAYEQLKVDEDSLYSCIGVAGAQAGEEINALEEEETDDD
FQGVIPVGRGLSTMTRPTT
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacagctgcctcaagttctgtattgatgatgaacgtgcctcaaacccgtgca
ccccttactcctcctaaagatgatactctctcaaggaagaaccggataaacctaattcag
cctcgccgattccctttgattcgattccactccaaccaccatcaatcttggaattccgtt
tcctccaaaaggtggtcacacgagattgctacgggtggatcaggctctcttagaaagaag
aataatgcttggaaacaatgtagttcttccctcggcgagagagtggtcggggcatatttt
ccagaacaatttaagtgcatgtcttgctcccttaaccgtcttagaagccgctatagcatc
aaaggatctacaccaactataccaagagcctttgttgataagtctgcttttaatttgtct
ggccattcacttgatactgcttctgtgaagcatgttcatgtcccatgtacatcgatgggt
ccaaatgagccacatgcagcaagtataggctgcccagatggtattcttgagagacaagat
tctgatttattagattcggaattagaaagggcaagactatttgagtttttgcattctgaa
cttccatgtcacccaaagttgcacagagggcaactgaaaaatggactccgttatcttatt
ctaccaaataaagttccaccaaacaggtttgaggcacacatggaagttcatgcaggatca
atagacgaggaagatgatgagcaaggaattgcacatatgattgaacatgttgcattcctt
ggaagtaagaaacgcgagaaacttctcggaacaggtgcccgatctaatgcttacactgat
ttccaccatacagttttccacattcattcaccaactagtacaaaggatgctgatggagat
ctactcccctctgtgctggatgccttgaatgagatagctttccacccaagtttccttgct
tctcgagttgaaaaggaaaggcgcgctatactttcagaactacaaatgatgaatactata
gaatatcgtgttgactgccagctgttacaacatctacattcagaaaacaagcttagcaaa
aggttcccgattggactggaagagcagattaagaagtgggatgcagataaaattaggaaa
tttcatgagcgttggtacttccctgcaaatgcaactctatacattgttggcgacattgat
aacatttcaaagacagttcaccagattgaaaatgtctttggacaaactggtctggaaacc
gagacagtttctgctccttctccaagtgcatttggtgcaatggctagttttcttgttcct
aaactctcagttgggctccctggaagttcgtcccgtgaaaaatcatctatttctcttgac
caatctaaaatcattaaaaaggaaaggcatgcggttcgtcctcctgtggagcattattgg
tctctccctggaagcaatgcaaatttgaagccaccacagatatttcagcacgagtttctt
cagaatttctcaattaatatgttctgcaagattccggtgagcaaggtccaaacatatggt
gacttgcgtaatgttttgatgaagagaatttttctatctgcactgcacttccggattaat
acaagatacaagagttcaaatccaccattcacttcagttgaattggatcatagtgattct
ggaagggaaggatgcactgtcacaactcttacagtaactgcagaacccaagaattggcaa
aatgcaattaaagttgctgttcaagaggttcgaaggcttaaagaatttggtgtcacaaaa
ggtgaattaaatcgctacatggatgctcttctaaaagatagcgaacatctggcagccatg
attgataatgtgtcatctgttgataatttggaatttatcatggagagtgatgctcttggc
catactgtgatggatcagagacagggacatgagagtttgtttggtgttgctggaacagtc
acacttgaagaagtcaattctattggtgccaagttattagaatttatctctgattttgga
aaaccaaccgcaccaattcctgcagcaattgttgcatgtgttccttcaaaagtgtatttt
gatggattgggtgaaactgagttcaagatatcatcaagtgagattatagctgccataaaa
tcaggattggaggaagcaattgaggctgagccagagcttgaagtgccaaaggaactgata
acttcaacacagttagaggagttacgattacaactcacgccgtcctttatccctttagtt
ccagatgcagattacacgaaattgcacgacccagaaacaggcatcactcagtgtcgtctt
tcaaatggaattgctgtaaattacaagatatctaaaagtgaatcccggggaggtgtcatg
cggctaattgtgggtgggggccgagcagctgaaagttctgagtcaaaaggagcagttgtt
gtgggtgttcgaactctcagtgagggtggtcgtgttggcaacttttcaagagaacaggta
gaacttttttgtgtgaatcacctgataaattgctctttggagtcaactgaggaatttatt
tgtatggagttccgctttactctgcgagacaatgggatgcgagcagcatttgagttactt
catatggtgcttgagcatagcgtttggctggatgatgcattggacagagccaggcaacta
tacttgtcatattaccggtctattcccaaaagcttagaacgtgcaactgctcacaagctc
atgacagcaatgttgaatggggatgagcgatttattgagccaaccccacaatcattacaa
aatctaacactgaaatccgtaaaggatgcagtgatgaatcagtttgttggtggaaacatg
gaggtcagtattgttggggatttctcggaggaggagattgagtcttgcattattgattac
ctgggcacagttagagcaacaagagattctgatcgtgaacaagaattcaatcctgtcatg
tttcgaccatcgccatctgatttgcaatttcaacaagtctttttgaaggatactgatgag
agagcatgtgcatatattgctggtcctgcaccaaatcgttggggtttcactgttgatgga
aaagacctatttgagtcgacgagtggcatttcagttacagctgatacacaaccaaattct
gacccacagcagatagacaggaaggatgtccagaaggataagcaaggaaaacttcgcagt
catcctctcttttttggcataacaatggggctactggctgagatcataaattcacggctt
tttaccacagtcagggattctcttgggttgacatatgatgtatcgtttgagttaagcctg
tttgataggcttaagcttggatggtatgtggtatcagtaacatcaactccaggcaaggta
cataaagcggttgatgcatgcaaaagtgttcttagagggttgcatagcaacaaggttgcc
cagagagagttggacagggcaaaacggacactgctaatgagacatgaaactgagattaag
tccaatgcctactggcttggattgcttgctcatttgcaagcctcttctgttccgagaaag
gacgtctcatgcattaaagatctcacttcactatatgaagcagcaactattgaggacata
tacgttgcatatgaacagttgaaagtagatgaggattctctgtattcatgcattggggtt
gctggggcacaagctggagaggagattaatgctttagaagaggaagaaacagatgatgat
tttcagggagtcatacctgtgggacgtggtttgtctacaatgacacggccaaccacttga
DBGET
integrated database retrieval system
