Populus trichocarpa (black cottonwood): 7462051
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Entry
7462051 CDS
T01077
Name
(RefSeq) glutamate receptor 3.4 isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7462051
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
7462051
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
7462051
NCBI-ProteinID:
XP_002321123
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Position
14:complement(10645976..10676061)
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AA seq
964 aa
AA seq
DB search
MDVSLNIAGGGCATRVFLMMKRVLLLLLLLITGICVPMEVVFGQAAANGNGTSVSSSSSP
RPSVANIGSLFTFDSVIGRAAGPAIAAAVDDVNSDPTVLPGTRLNLISHNTNCSGFLGTV
EALQLMENRVVAVIGPQSSGIAHIISHVVNELHVPLLSFAATDPSLSALQYPYFLRTTQN
DYFQMYAIADLVTSYGWREVIAIFVDDDCGRNGISILGDALAKKRAKIAYKAALTPGVPR
SQISDLLLEVNQMESRVYVVHVNPDSGLSIFSVAKSLHMMTKGYVWIATDWLPSVLDSLE
PDDTDTMNLLQGVVSLRHHNPETDLKRSFMSRWSNLNHKKSIGASGFNSYALYAYDTVWL
AARALDVFLNEGGNLSHSTDPKLSDTKGSAMNLASLRVFDGGQQFLQTLLRMNFSGPSGQ
IQFDLDRNLVRPAYDVLNIGGTGSRRIGYWSNYSGLSTISPEVLYTKPRNNSSSNQHLSS
VIWPGETSLVPRGWVFPENGKPLRIAVPNRISYQQFVAKDKNPPGVRGYCIDVFEAAINL
LPYPVPRTYMLHGDGKRNPEYNEIVQAVAQDRYDAAVGDVTIVTNRTKIVDFTQPFMESG
LVVVAPVKEQKSSPWAFLKPFTIQMWLVTGAFFLFVGAVVWILEHRMNREFRGPPSQQIM
TIFWFSFSTMFFSHRENTVSTLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEG
IDSLVSSNEPIGIQDGSFARNYLMDELNIAGSRLVILKSQQEYSTALQLGPKNGGVAAIV
DELPYIELFLSSTNCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIH
NKWLTHGDCMEQINEIDDSRLSLTSFWGLFLICGISCFIALTTFCCKVIFQFRRFTPEGG
EEAEVDEIQPGRPRRSLHSTSFKDLIDFVDRKEAEIKEMLKRKSSTDIKRQASPSSDVHA
NSPA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtctttgaatattgctggtggtggttgtgctactagagtatttttgatgatg
aaaagagtgttgctgctgctgctgctgttgattactggtatttgtgtgcccatggaagtt
gtttttggtcaggcagctgcaaatggaaatggaactagtgtttcttcttcttcttctcca
cgaccgagtgttgcaaatataggaagtttgtttaccttcgattcagtgatagggagagca
gctgggccagctattgctgctgctgttgacgatgtcaattctgatccaaccgttcttccc
gggactagattgaaccttatttctcacaacactaattgcagtggatttcttggaactgtc
gaagctttgcagctgatggaaaaccgtgttgttgctgtgattggcccccaatcttctgga
atagctcatataatatctcatgttgtcaacgaacttcatgttccacttttatcatttgca
gcaacagatccttccctttcagcattacagtacccatatttcctccgcactacacagaat
gactatttccagatgtatgcaattgctgatctggttacgtcttatggttggcgagaggta
attgccatttttgtggatgatgattgtggcaggaatgggatatctatattgggtgatgcc
ctggcaaaaaagcgtgccaagatcgcttacaaggctgccttgacccctggagtgcccaga
agtcagatctccgacttgttgcttgaagttaaccagatggaatctcgggtttatgttgta
catgtaaatccagattccggtttgtcaattttttctgtagctaaaagtcttcatatgatg
accaaaggctatgtttggattgctacagattggctcccttcggttttagattcattagaa
ccagatgacactgacacaatgaatctcttacaaggggttgtttctcttcgccatcacaat
ccagaaactgatctcaaacgaagttttatgtctagatggagcaacctaaaccacaagaag
agcatcggtgcttctgggttcaattcttatgcactttatgcttatgatacagtatggtta
gctgcccgagctcttgatgtttttctcaatgaaggtggaaatctatcacactctactgat
ccaaagttgagcgacacaaaaggaagcgcaatgaacttggcatcactgcgtgtttttgat
ggaggccaacagtttctccagacacttctcaggatgaacttcagtggtccaagtggtcaa
attcaatttgatttggataggaacttggttcgtccagcatatgatgttcttaacattggt
gggacagggtctagaaggattggttattggtcaaattactctggtctttcaacaatttct
ccagaggtcttgtatacaaagcctcggaataattcttccagtaatcaacatctttccagt
gtaatatggcctggtgaaacttcgcttgtacctcgaggatgggtattccctgaaaacggt
aagccactgcgaattgctgtgcctaatcgcataagttatcaacaatttgtcgctaaagac
aaaaaccccccaggggttaggggatactgcattgatgtcttcgaagctgcaataaacttg
ctgccatatcctgtcccacgcacatatatgctacatggagatggcaagcgaaatccagag
tacaatgagattgtccaagcggttgctcaagatcgttatgatgcagctgttggagatgtt
actatagtcacaaataggacaaagattgtagattttacgcagccttttatggaatcaggg
ctggttgtagttgctccagtcaaggaacaaaagtctagcccttgggcgttcctcaagcca
tttactatccaaatgtggctcgtcacaggtgccttctttcttttcgtgggagctgtagtc
tggattcttgagcaccgaatgaatcgtgaattcaggggtcctcctagtcagcaaattatg
acaatattctggttcagtttctcaacaatgtttttttcacacagagagaatacagtgagc
accttgggacgttttgtgctgatcatatggctatttgtagtgttgattatcaattcaagc
tacacagctagtttgacatcaatcctcacagtgcagcagttaacatcacggatcgaaggg
attgacagcttggtctcaagtaatgaaccgattggaattcaagatgggtcatttgcaagg
aactacctgatggacgagctcaacatagcaggatctagactcgtaatattgaaaagccag
caggaatacagtactgcccttcaacttggaccaaaaaatggtggcgtggctgcaattgtt
gatgagcttccttatattgagctcttcctgtcttccaccaattgtaaatttaggaccgtg
ggccaagagttcacaaaaagtggatggggatttgcgtttcaaagggactctcctctagct
gttgacttgtcaactgccattcttcaactatcagaaaatggtgatctccaaaaaatccac
aacaaatggctgacacatggagattgcatggagcaaatcaatgaaatcgatgacagccgt
ctctccctgacgagtttctggggtctgtttcttatttgcggcatttcatgcttcattgct
cttaccacattctgctgtaaggtcattttccagttccgtagatttactccagaaggtggt
gaggaggcagaggttgatgagattcagccaggaaggcctagacgctccttacactcaact
agcttcaaggatttgattgattttgtagacaggaaagaggcagagattaaggagatgctt
aaacggaagagtagtactgatatcaagcgacaagctagcccgagctcagatgtgcacgcc
aattcaccagcttag
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