Populus trichocarpa (black cottonwood): 7462248
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Entry
7462248 CDS
T01077
Name
(RefSeq) heat shock factor protein HSF30
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7462248
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7462248
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GFIT
Motif
Pfam:
HSF_DNA-bind
ZapB
CC_Liprin_beta
TMF_TATA_bd
PEP-utilisers_N
HpHbR
APG6_N
BRE1
Motif
Other DBs
NCBI-GeneID:
7462248
NCBI-ProteinID:
XP_002309492
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Position
6:complement(23114973..23117533)
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AA seq
388 aa
AA seq
DB search
MEGVVVKEEETVTCTGGGASSSSSSSSFSPHPMEGLNEVGPPPFLTKTYEMVEDPSTDTV
VSWSGGRNSFIVWDSHKFSTTLLPKHFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFL
GGQKHLLKTIKRKRHLSQTTQQQGGGACIELGQFEFEGELERLKRDRNVLMAEIVRLRQQ
QQQSREHIAAMEDRLRSTERKQQRVMTFLAKALNNPSFIEQFAQRAAQRREIRGVEIGRK
RRLTASPSVENLQEVASVALGSSQFVDYMNQDLPTIENEMETLFSAVLDNESSSDIKDPI
ASSMDTASGGSTLDAVNETIWEELLTDDLVSGEPNEVVVSDEPEVDVEVEDLVAKPVDWS
DDFQDLVDQMGYLRPERQQRIFRRGVWI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagggagttgtagtgaaagaagaggagacagtgacatgtactggaggtggagcttct
tcatcttcatcatcctctagtttctctccgcatccaatggaggggttaaatgaagtgggc
ccacctccgttcttgacgaagacatatgaaatggtggaagacccttcaacggatacagtg
gtttcgtggagtggaggtcgcaatagcttcatagtttgggactctcataagttctctact
actttgcttccgaaacacttcaaacacagtaacttctccagcttcattcgacagctcaac
acttatggtttcaggaaggttgatcctgaccggtgggaatttgccaatgaagggtttttg
ggagggcagaagcatctattgaagaccatcaaacggaaaagacatctctcacagaccaca
caacaacaaggtggaggagcttgcattgagttaggacaatttgaatttgaaggagagctt
gaaaggttaaaaagagaccgaaacgtgttaatggcagagattgtaaggcttaggcagcaa
caacagcagtcgagggaacacattgctgcgatggaggataggttacgaagcacagagaga
aaacagcagcgggtgatgacattccttgctaaagctctcaacaacccatcctttatcgag
caatttgcacaaagggctgcacagaggagagaaataagaggtgttgaaattgggcgtaag
aggagactcactgcaagcccaagtgttgaaaatttgcaagaagttgcatctgtggcatta
ggtagcagccaatttgttgattacatgaatcaggatttaccaactattgagaacgagatg
gagacgcttttctctgctgtcttggacaatgaatcaagcagtgatatcaaggacccaata
gcaagttctatggacacagcaagtggtggtagcactttggatgctgttaatgagacaatt
tgggaggagttacttactgatgatttagtttccggggaacctaatgaagttgttgtgagt
gatgaaccagaagttgatgtggaagttgaggatttggttgcgaaacctgtggactggagt
gatgattttcaggaccttgtggatcaaatgggttatctcaggccggaacgccaacaaaga
atttttcggaggggtgtctggatttga
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