Populus trichocarpa (black cottonwood): 7462254
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Entry
7462254 CDS
T01077
Name
(RefSeq) protein indeterminate-domain 7 isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7462254
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7462254
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_6
HTH_92
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
7462254
NCBI-ProteinID:
XP_006382013
UniProt:
U5G8R0
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Position
6:23177536..23182340
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AA seq
537 aa
AA seq
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MMKGLVMDENMSNLTSASGEVSASSGSRIETGAKHPQHSFDSTNQPPPKKKKNLPGNPDP
DAEVIALSPNSLQTTNRFLCEICNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYV
CPEVTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTRE
YRCDCGTLFSRRDSFITHRAFCDTLAEESARSMTVLSSQQPGSSASHLMNLQALSVKREQ
DQNQYLFNPRPDSIPPWLACPPIGEAGPGPPQINLSSQLFPAHLDQSFLQHGNPSPNPTV
LPPFQPSSTASPHMSATALLQKAAQMGVTVSKPSPSPATAAILRPHQGHMSDHQNPGFGS
TLPATSTANPGLFFTSREEMGSGFGHGLASLEDKAGTVTSGIMEYLAASDGGGTSLVHDM
MSSLSSASGFDGSSFDNEDFNGMLNPKRDSSNFQEILSKSTESRFIRSDAASGSHHGGGN
DGLTRDFLGLKAFPHKDFLNLPAGFDHISPSTYGQRNQNLPPPWQGSSMDFQLYNKK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaggcttggtaatggatgagaatatgtccaatttaacttcagcatccggtgaa
gtaagtgcttcttcaggcagcagaattgaaaccggtgctaaacacccacaacactccttt
gattcgactaatcaaccaccaccaaagaagaagaaaaatcttccaggaaacccagaccca
gatgcagaagtgatagctttgtctcccaacagtctacaaacgacaaacagatttctatgt
gagatctgcaacaaaggattcaaaagagatcagaatcttcaacttcatagaagagggcat
aacctgccatggaaactaaagcaaagaacaaacaaggaggtgagaaagaaggtgtatgtg
tgtccagaggttacatgcgtgcaccatgacccatcaagggctcttggggaccttacaggg
atcaagaagcactttagcagaaagcatggtgagaagaagtggaagtgtgaaaagtgctca
aaacgttatgcagttcaatcagactggaaagctcactctaaaatttgtggcacaagagag
tatagatgtgattgcggtactcttttttctaggagggacagtttcatcactcacagagcc
ttctgtgatactttagcagaagagagtgcaagatctatgacggttctctcctctcaacag
cctggctcctcagcttcacacctgatgaacttacaagccttatcagtcaaaagagagcaa
gatcaaaaccagtatctttttaatccaagaccagatagcatcccaccatggttagcttgt
ccaccaataggagaagctggtccaggtccaccacaaatcaatctctcctcgcagttattc
ccagcacatttagaccagtcatttttgcaacatggaaaccctagccctaaccctactgta
cttcctccattccagccctcatcaacagcttcccctcacatgtctgccactgcgttgctg
caaaaagcagcacaaatgggggtgactgtgagcaagccttccccgtcacctgctactgct
gccatacttagaccccaccaaggtcacatgtctgatcatcaaaaccctggtttcggttcc
acattgccagctacgtccacagcaaatcctggtctattttttacatcacgtgaagagatg
ggaagtgggtttggtcatggtctggcatctctagaggataaagctggtactgtcacctct
ggtatcatggaatatcttgctgcaagtgatggaggagggacttctctagtccatgatatg
atgagttctttgtcttctgcgagtggatttgatggttcatcttttgacaacgaggatttc
aatggaatgttgaatccaaaaagagacagtagtaattttcaggaaattctctccaagtca
acagagtcccgatttataaggagtgatgctgcatctggtagtcatcatggaggcggcaat
gacggcttgacaagagatttcttgggtcttaaagcctttccccacaaagactttctaaat
ctaccagctgggtttgatcacattagcccttcaacatacgggcaaaggaaccaaaatctg
ccaccaccttggcaaggaagctccatggactttcagctatacaataaaaagtag
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