Populus trichocarpa (black cottonwood): 7462291
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Entry
7462291 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7462291 isoform X1
KO
K11793
cereblon
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7462291
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
7462291
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GFIT
Motif
Pfam:
LON_substr_bdg
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
7462291
NCBI-ProteinID:
XP_024458541
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Position
6:23852897..23857212
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AA seq
530 aa
AA seq
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MDDVRILEAERRRIQELEFEELQVEEEVDGRDSTGAGSSDDFTFNPCLASLHTYLGEVED
THHRLAFLDGGAVLNLPLFYLEGVVLFPEATLPLRVVQPNFISAVERALVQVDNPFIVGV
VRAYRGSDSDNRQLRFATVGTTAEIRQYRRLEDGSLNVVTRGQQRFHLKHRWIDVEGMPC
GEVQIIQEDIPLRTPKDAFGKLAPLSNLRSHRLSRVLPSLGYGHSDNDSEANSDDSFENA
LSSAGMRTHQSALDSCYGYDVMDESTSSDDDKFLSQTEMRSTRSHLNESKGPLYSDTGKN
ADNTTLEIGNSSDLAKKGEGSKRCWKNTDLNHFHRVPRAFWPHWVYRMYDSYCLAERAAD
MWKQIVGAPSMDGLVRKPDLLSFYIASKIPVSEETRQELLEIDGISYRLRREIGLLESFD
LVQCKTCKTVIAQRSDMLVMSTEGPLGAYVNSHGYVHEIMTLQKANGLALIGRATVEYSW
FPGYAWTIAECASCETQMGWLFTATKKKLKPQSFWGIRSSQVADDTRVTL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgttagaattttagaggcagagaggcgccggattcaagagcttgaattcgaa
gaattacaggtcgaggaagaagtcgatggtcgtgattccactggtgctggttcatctgat
gatttcaccttcaacccttgtttggcttcactgcatacttatcttggcgaggttgaagac
actcatcatagactggcttttttggatggaggtgccgttttgaaccttccattgttctat
cttgaaggagttgttcttttcccagaggctacacttcctttgagagttgttcaacccaat
ttcatttctgctgttgagagggcattggttcaagtagataatccttttattgtaggtgtg
gttcgtgcatacaggggttctgattcggataacagacaattaaggtttgcaactgttggg
acaactgcagagattcgacaataccggcgattagaggatggatcactgaatgtagttact
cgtggccagcagcggtttcatctaaaacatcgttggattgatgtggaaggaatgccctgt
ggagaggttcaaatcatccaggaagatattccgttaaggacacccaaggatgcttttgga
aaattggcaccattaagtaatctacgcagtcataggctctcacgtgtgctgccttcactt
ggatatgggcatagcgacaatgattcagaggcaaattcggatgacagcttcgagaatgcg
ctctcatcagcaggcatgagaactcaccagtctgcactcgattcctgttatggttatgat
gtgatggatgaatcaactagcagcgatgatgacaagttcttgagtcagacagaaatgaga
tctacaagatctcacctaaatgagtcaaaagggccattgtactcggacactggaaaaaat
gctgataatactaccttagagattgggaatagttctgatttggcaaagaaaggggaaggg
tcaaagaggtgttggaaaaatactgacttaaaccactttcacagggttccaagagccttc
tggccccactgggtataccgtatgtatgactcctattgtcttgctgaaagagcagcagat
atgtggaaacagatagttggggcaccaagcatggatggtcttgtgagaaagcctgacctt
ttgtcattttatattgccagtaaaattcctgtttctgaagagaccaggcaggagcttctg
gagattgatggcatttcatatagactgcgccgggaaattggtttacttgaaagttttgac
cttgttcaatgtaaaacttgtaagactgtaatcgctcagcggagtgatatgttggtgatg
tctactgaaggtcctcttggtgcttatgtcaattcacatggttatgtgcatgagataatg
acactccagaaagctaatgggttagcactcatagggcgagccactgtggaatacagctgg
tttcctgggtatgcttggacaatcgcagaatgtgcctcctgtgaaacccagatggggtgg
ctttttactgccacgaagaagaagttgaagcctcaatcgttttggggaatacggagttcc
caggttgctgatgatacacgagtaaccttatag
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