Populus trichocarpa (black cottonwood): 7462300
Help
Entry
7462300 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7462300
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7462300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
F-box_5
LRR_4
LRR_At1g61320_AtMIF1
LRR_At5g56370
LRR_8
LRR_14
LRR_FBXL18
F-box
Motif
Other DBs
NCBI-GeneID:
7462300
NCBI-ProteinID:
XP_024458846
LinkDB
All DBs
Position
6:24022237..24024785
Genome browser
AA seq
360 aa
AA seq
DB search
MSKLGDDELALIINWVIDQNDRQSFSLVCKQWLNVEGQTRLSIRVFEPELLHKFLPRFPN
LLTFESSKRITNNHLEFIANTCPKLEFLNLKQQSIESQKLDGFDDLLDFDDVGVLAIANG
CCKLCKVLFRRRGRVGNVGVISLVKCAQSLSVLDLGWCSLINDSSLEAIGCMNSIRALNL
EGCSLVTDKGLTFLATGSSSRTLKRLVLAECDRLTDFGVSLLQGMCCLEELNLAECGPKV
TDNGGMAVASIASLKRMNLSWLINVSDITLVAIAGNCRNLVALDLTGCEMITGTGIRALG
YHECLESLVLASCYNICGDDVDMVLKCKSLRSIVLDKGLKMWIPMRMQENISRFCQLHWR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaactaggtgatgatgagttagccttaattatcaactgggttattgatcagaat
gacagacaatcattctctctagtatgcaagcaatggcttaatgtagaaggccaaacccgt
ttatcaattcgcgtttttgaacccgaactactccataaattcttgcccagattcccaaat
ttgttaacttttgagtcttcaaaacgaatcaccaacaaccaccttgaattcatagccaat
acatgtcctaaacttgagtttctcaatctcaagcaacaatcaattgaaagccaaaaactt
gacgggtttgatgacttattagattttgatgatgttggtgttttagctattgcgaatggc
tgttgcaaattgtgtaaagtattgtttagaaggagagggagggttgggaatgttggggtt
attagtcttgtcaagtgtgcacaaagtttgagtgttttagatttggggtggtgtagcttg
ataaacgattcatcacttgaagcaattgggtgtatgaattcgattcgggctttgaattta
gaaggttgttctttggttactgataaaggtttgacctttttggcaaccgggtcttcttca
aggacattaaagaggttggttcttgcagaatgtgatagacttactgatttcggggtgtca
ttgttgcagggaatgtgttgtttggaggagttgaatttggctgaatgtgggccaaaagtg
acggataatggaggtatggcagttgcctcgattgctagtcttaaaagaatgaatctttca
tggttgatcaatgtgtcagatattacacttgttgcaatagctgggaattgtaggaatttg
gtagctcttgatttaactgggtgtgagatgattactggaactggcattcgtgcccttggt
tatcatgagtgtttggaatcattagtgttggcttcctgttacaacatttgtggggatgac
gtggatatggttttgaaatgcaagtcattgaggtctattgtgcttgataaaggattgaag
atgtggataccaatgaggatgcaggaaaacattagcaggttttgtcagttgcattggaga
taa
DBGET
integrated database retrieval system
