Populus trichocarpa (black cottonwood): 7462452
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Entry
7462452 CDS
T01077
Name
(RefSeq) alpha-mannosidase At3g26720 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
7462452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7462452
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
7462452
Membrane trafficking [BR:
pop04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
7462452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
7462452
NCBI-ProteinID:
XP_002301760
UniProt:
B9GNG2
LinkDB
All DBs
Position
2:23068972..23078352
Genome browser
AA seq
1020 aa
AA seq
DB search
MAAAGMLLWCLTIYLQGGLWLSVESKYIAYNTTGSIVPGKINVHLVPHSHDDVGWLKTVD
QYYFGGNNSIRGACVQNVIDSVMSSLFEDKNRKFIYVEMAFFQRWWRQQSEAMKIKVKDL
VNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHKYIKDEFGQLPRVGWQIDPFGHSAVQ
AYLLGAELGFDSLFFARIDYQDRAKRLKEKNLEVVWQGSKSLGSTSQIFTGIFPRHYDPP
DGFTFEINDVSPPIQDDVLLFDYNVQERVNAFVAAALAQANVTRTNHIMWLMGTDFRYQY
ANSWFRQMDKFIRYVNQDGRVNALYSTPSIYTDLKHAADEEWLLKTEDFFPYADHPNAYW
TGYFTSRPAFKGYVRLMSGYYLAARQLEFFKGRNSSGPNTDALADALAIAQHHDAVSGTE
RQHVAADYALRLSIGYKEAEKLVASSLASLAESTSNIRQGNTVINFQQCPLLNISYCPPS
EADLSDGKSLLVVVYNPLGWKREEVIRIPVSTEKVVVRDSSGGEIESQLLPISNATPHIR
RKYVKAYLGKFPREALKYWLAFSASLPPLGFNTYIVSGAKQTGPRSTISLVQTSNESTNE
TIEVGQGSLKLLYSADEGKLTHYLNSRSLVTSTAGQSYSYYTGNDGTDKDPQASGAYVFR
PNSTLPIKPQYQVPLTVMRGPLLDEVHQQLNSWISQVTRVYKGKEHAEVEFTIGPIPVDD
GTGKEITTQITTTIKSNRTFYTDSNGRDFIKRVRDSRTDWELQVNQPIAGNYYPVNLGIY
IQDNSTELSLLVDRSVGGSSLVDGQIELMLHRRLLHDDARGVGEVLNETVCVLDRCEGLT
IQGKFFLRIDQLGEGARWRRTFGQEIYSPVLLAFTEQDGSTEMNFPLPTFSGIDPSYSLP
NNVAVITLQELENGKVLLRLAHLYETGEDKDYSVMASVELKMLFPKKKIVEVTELSLSAN
QERTDMEKKRLVWKVEGSTGEEPKVVRGGPVDPAKLVVELAPMEIRTFHVDFDHLQMFGS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggggatgttgttgtggtgtttaacaatctatttgcagggggggctttgg
ttgtccgtggaatccaagtacatagcttacaacaccacagggagcatcgttcctggcaag
attaacgttcatttggtaccccactctcacgatgatgttgggtggttgaagactgttgat
cagtactattttggcggtaacaattctatccggggagcgtgtgtgcagaatgtgatagac
tctgtaatgtcttctttgttcgaggataagaatcgcaagttcatctatgtagagatggca
ttcttccagagatggtggagacagcaaagtgaagcaatgaagattaaagtcaaggacctt
gtcaactctggtcaacttgaattcataaatgggggcatgtgtatgcatgatgaggcaacc
ccgcattatattgatttgattgatcagacaactttaggccacaaatatatcaaagatgaa
tttggtcagcttccaagagttggttggcagattgacccttttggacattctgctgttcaa
gcctatttgcttggtgctgagttaggattcgactctcttttttttgctcgaatcgattac
caagatagagctaagcgattgaaggagaagaatcttgaggttgtctggcagggttccaag
tcccttggttcaacttcacagatatttaccggtatatttcctaggcattatgaccctcct
gatggattcacatttgaaataaatgatgtgtcccctcctattcaggacgatgttctcctg
tttgactataacgttcaagagagagtcaatgcctttgttgctgctgctttagctcaggct
aatgtaaccaggacaaatcatataatgtggctgatggggacggattttcgctatcagtat
gcaaattcatggttcaggcagatggacaagttcattcgttatgtgaatcaggatggtcgg
gtaaatgctctatattcaaccccatccatttataccgatttgaaacatgcagcagatgaa
gaatggcttctcaaaacagaagattttttcccatacgcggatcatccaaatgcatattgg
actggttattttacaagcaggccagccttcaaaggctatgtcagattgatgagtggatac
tatcttgctgcaaggcagctagaattctttaaaggcagaaattcttcagggccaaacact
gatgctcttgctgatgctttggcaattgcacaacatcatgatgcagttagtggtacagaa
aggcagcatgttgccgctgattatgctctgcgactgtcaattggctataaggaggctgag
aaattggttgcctcttcacttgcttctttggcagagtcaacttcaaatatcagacaaggg
aacactgtcatcaattttcagcaatgtccacttcttaatataagttactgtcctccttca
gaagctgacttgtctgatgggaaaagcttgctggtggttgtttacaatcctctaggatgg
aaaagagaggaagtcatacgaattccagtttccactgaaaaagttgtggttcgagattct
agtgggggagaaattgaatctcagcttctacctatatcaaatgcaacaccacatataaga
aggaaatatgtaaaagcatatttgggtaaattcccacgtgaggcacttaagtattggctt
gcattttcagcatccctaccaccccttggtttcaacacctacatcgtttctggagcaaaa
cagacaggccctaggtcaactatctcattggtacagacatcaaatgaaagtacaaatgaa
accatagaagttggccaaggaagtttgaagctactttattctgcagatgaagggaaactc
actcattatttgaatagcagaagcttggttacctccactgctggacaatcatacagttat
tatactggaaatgatggcactgataaagatccacaggcctctggggcatatgtttttcga
ccaaacagtacattaccaataaaaccccaataccaggttcctttgactgttatgcggggt
ccactactggatgaagtacaccaacagcttaattcatggatatcgcaggttaccagggtc
tacaaaggaaaggagcatgctgaagttgaattcactattgggcctatacctgtagatgat
ggaacagggaaagaaatcacaacccaaatcacaaccacaataaagagcaatagaacgttc
tacacagactctaatggacgtgacttcattaaacgggtgcgagactcaaggacagactgg
gagctccaagtgaatcaaccaattgctggaaattattaccctgtaaatcttggaatttat
attcaagacaacagcacggagctctccttgttggtggaccgctcagtgggaggatctagc
ttagtggatggtcaaatagagctgatgcttcataggaggttgcttcatgacgatgcaaga
ggtgttggtgaagtgttgaatgagacagtctgtgtcttggatagatgtgaaggtttaact
atccaaggaaagttctttctcagaattgatcaactaggagaaggtgccaggtggcgtcga
acatttggccaagagatatattccccagttctgttagccttcacggagcaggatggaagt
accgagatgaatttcccgctaccaactttttcaggaattgatccatcttactcgttaccc
aataacgttgctgtcataactctgcaggaacttgaaaacgggaaagtgctccttcggttg
gctcacctttatgagaccggtgaggacaaggattattcagtaatggcaagcgtggaattg
aaaatgctatttccaaagaagaagatagttgaagtcacagaattgagcttatctgccaat
caagaacgaactgacatggaaaagaagaggctggtgtggaaagtcgaaggctccaccgga
gaagaacccaaggtggtgcggggaggacctgttgatcctgccaagctagtggtggagctt
gcccccatggaaatccgcactttccacgtagactttgatcacctccaaatgtttggttcc
tga
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integrated database retrieval system
