KEGG   Populus trichocarpa (black cottonwood): 7462478
Entry
7462478           CDS       T01077                                 
Name
(RefSeq) actin-interacting protein 1-2
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pop04990]
    7462478
Domain-containing proteins not elsewhere classified [BR:pop04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   7462478
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 KNTC1_N Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 7462478
NCBI-ProteinID: XP_002322087
UniProt: B9IE99
LinkDB
Position
15:3793149..3798096
AA seq 609 aa
MTELAETYACVPSTERGRGILISGHPKTNKILYTNNRSILILNLDNPLDVSVYGEHAYQA
TVARYSPNGEWIASADVSGTVRIWGAYNDHVLKKEFKVLTGRIDDLQWSPDGLRIVASGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKF
KSSHRDHSNFVNCIRFSPDGSKFISVSSDKKGILFDGKTGEKIGELSSEDGHKGSIYAVS
WSPDGKQVLTVSADKSAKVWEICDDGSGKLTKTLTSSDSGGVDDMLVSCLWQNDHLVTVS
LGGTISVFSASDLGKSALQISGHMKNVTSLSVLKNVPKTILSSSYDGLIVKWIQGIGYSG
KLRRKENSQIKCLAAAEEEVITSGFDNKLWRVRFLGDQCGDADSIDVRSQPKDISLALLC
PELALVAIDSGVVMIRGTKVVSTINLDFAVTASAISPDGSEAIIGGQDGKLHIYSVTGDT
LTEDAVLEKHRGAVSVIRYSPDVSMFASGDLNREAVVWDRASREVKLKNMLYHTARINCL
AWSPDSSMVATGSLDTCIIIYEIDKPASSRMTIKGAHLGGVYGLAFTDDRSVVSSGEDAC
VRVWKVNPQ
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgacagagctcgcagaaacctacgcttgcgttccctcgaccgaacgaggcagagggatc
ctgatttccggtcatccaaaaaccaataaaatcctttacactaacaaccgatccattctc
atcctcaaccttgacaacccgcttgacgtctccgtctatggtgagcacgcttaccaagcc
accgtcgcacggtactctcccaatggcgagtggatcgcctccgctgatgtatctgggact
gtcaggatctggggtgcttacaatgatcatgtcttgaaaaaagaatttaaagtactcacc
ggtcggatcgatgatcttcagtggtcccctgatgggttgaggatcgtcgcctctggggat
ggaaaagggaaatctcttgttcgcgcttttatgtgggattcagggactaatgtaggggaa
tttgatgggcattcacggcgagttttgagctgtgcgtttaagccaactaggccatttcga
attgtcacgtgtggagaggatttcttggttaatttctatgaaggaccgccatttaaattc
aagtcatctcacagggatcattcaaattttgtcaattgtatacggttttctccagatggt
agcaagtttatcagtgtaagttctgataagaaaggcatactgtttgacggaaagacagga
gagaagatcggagagttgtcatctgaggatggtcataagggcagtatttatgctgttagt
tggagtcctgatggtaaacaggtgctaacagtatctgccgacaagtctgcaaaagtgtgg
gagatctgtgatgatggtagtggaaagttgacaaaaactttgacttcttctgactctggt
ggagtggatgatatgctagtcagttgcctttggcagaatgatcatcttgtcactgtttct
cttggtggcacaatcagcgttttctcagctagtgatcttggtaaaagtgcactgcaaata
tctggtcatatgaagaatgttacctctttatctgtgcttaaaaatgtccctaagacaatc
ctgtccagcagctatgatggtttgatagttaaatggattcaaggcattggatacagcggc
aaattgcggaggaaggagaattctcaaattaaatgcttagctgctgctgaagaagaagtc
atcacatctggttttgataataagttatggagagttcgttttcttggtgatcaatgtgga
gatgcagattccattgatgtccgcagccaaccaaaggatataagtcttgcccttctctgc
cctgagcttgctttggttgcaattgattcaggtgttgtcatgattcgtggtacaaaagta
gtgtcaaccatcaatcttgactttgctgtgacggcatctgcaatttcacctgatggaagt
gaagcaatcataggtgggcaggatggaaaattgcacatatattctgtcacgggtgataca
ctcacagaagatgcagtccttgaaaaacatcgtggagctgtcagtgtcatccgctactct
ccagatgtttcaatgtttgcttctggtgatttaaatagggaagctgtagtttgggatcgt
gcttccagagaggtgaagcttaaaaacatgttgtaccacactgcccgcataaactgcctt
gcttggtctcctgatagcagcatggttgctactggatcgcttgacacctgtataatcata
tatgaaatcgacaagccagcatctagtcggatgaccatcaagggagctcacttgggtgga
gtttatggattagcatttactgatgatcgtagtgtggtaagttctggtgaggatgcctgt
gttcgtgtttggaaggtaaatccacagtga

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