Populus trichocarpa (black cottonwood): 7462515
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Entry
7462515 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7462515 isoform X2
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7462515
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7462515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-binding_7
Motif
Other DBs
NCBI-GeneID:
7462515
NCBI-ProteinID:
XP_002322121
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Position
15:3821617..3830834
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AA seq
1244 aa
AA seq
DB search
MKAFSLESPPQFFSLNPKKFLHTPSCDHTMSRFRRPNDDDEEEEEDDDDDFQNDMEALRQ
ACLLTGTNLTNISPSAAVSDGSGEADGNSCGGASVSDSGSEDDFELFRSVQNRFATSANS
LEPLSLKPLCALPPVSDDEEDDFETLCAVKRRFAAYDNNNNQEKLKTEMEKSEVGVSDNS
LAERNTACEVLPVTEQDDNAANLLGDNVEIGNSASAEENELDSGRLSTLELDYSSFPKSA
QVFIDAIKRNRSCQKFIQNKLIQIEARIEENNKLKDKVKILKDFQFSCRKITGMALSLRK
DPRIQLVSARKTSNSKHPKVNGKKVSPLQDGPVENSHVANYRTALTNFPLSLNRKKWTET
EKENLGKGIRQQFQEIMLQFSMDQFSSEGSPEDGKNLDSILVSIRDLEITPEKIREFLPR
VNWDQLASSYVAGRSGAECEARWLNFEDLLINQSPWTIKEDKNLLLNVQEKGVTNWFDIA
VSLGTNRTPSQCLSRFQRSLNARILKREWTKEEDAQLRIAVETYGERDWQSVACTLEGRA
GTQCSNRWKKTLHPAIRRVGRWTLDEDKRLKVAVKLFGPKKWDKIAQFVPGRTQVQCRER
WVNCLDPSMNRDEWTEEEDLRLKAAIEECGYCWSKVAERLPQRTDNQCLRRWKVLVPHEV
PLLQAARRMQKAALISNFVDRESERPALGPNDFVPLAITGPVSDPEKMDQSRKRKRKLRR
EESQMEKVAAPGNASKKIRSNRSRKKVQISSKEVPEIPDGTQVGNLGGSRSVVTETTMEY
CSENNRHAERGQDHPSSNSNLTPLMTTSFQGVDSGQNQQLPDLHPKGRKPVDRDGNSKSL
LLSPPENLDAGIINGDVSQTFHPNSTTSSKKRRAHKQHSRKNICAKSSEGSSVLSETTID
ASALVNDYLDSNLVTTNEEDNILGQRDAPGKKRVPKLHSESSEWTGSLDCLLPPHENSEL
RVTSTEIMNKSSLFGTPTNEKRKAFKLPCRRKIRNEEPSRKDQCFAAVPCQQDTSKKSKA
RGKSCSKKVLETKNEDDVVLASFLRDKSKKKRLKVAQNADQACSSSSMITRPEVLSRVDQ
PSNGNKLSSAVRNSEGQTCSHGRSSENGLSCDMYAHQSNHMQTERCELDVNNRGIFAPME
GVREPGSIDQEAVLEPGDISPAGSGSRVNTHSHSRKGPQLHSKGAEQPRNDTGPDKLSCS
VKNSIGSSSKPTIIGNDIEPGGRSSHSPSASGEALKYYKRRSKR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctttttccctcgaatctccaccacaattcttctccttaaaccctaagaaattc
cttcatacgccatcgtgtgatcacacaatgtctcgtttccgacgcccaaatgacgacgat
gaggaggaggaagaagatgacgacgacgacttccaaaacgacatggaggctctcaggcaa
gcttgcttactaactggcactaacctcaccaatatctctccttccgccgctgtctccgac
ggaagcggtgaagcagatggaaattcctgtggtggcgcctccgtttcggattcggggagc
gaggatgactttgaattgtttcggagcgtccagaatcggtttgcgacatcggcgaattca
ctcgagccgttatctttaaaacctctttgtgcgcttccgccggtttcagatgacgaggag
gatgatttcgaaacactctgtgctgttaaacgccgttttgccgcctatgataacaataac
aatcaagaaaaattgaaaactgaaatggagaaatctgaggttggagtttcggataattca
ttagctgaaagaaatactgcttgtgaagtgttacctgttactgaacaagatgataatgct
gcgaatttgcttggtgataatgtggagatagggaattctgcttctgctgaggagaatgaa
ttggatagtggtagattatctacgttggagttggactactctagttttccgaagtcggct
caggtgtttattgatgcaattaagaggaataggtcgtgtcagaagtttattcaaaataag
ttaattcagattgaagcaagaattgaggagaataataaattgaaggacaaggtgaaaatt
ttgaaagattttcagttttcgtgtagaaaaattacgggaatggcgttgtccttgaggaag
gatccacggatccaattagtgtcagcacgaaagacatcaaattctaagcatccgaaggtt
aatggtaaaaaggtctctcctttgcaagatgggccagtggagaactcgcatgttgctaat
tatagaacagcattgactaattttccactctcactgaatcgtaaaaagtggacagagaca
gagaaggaaaatcttggaaagggaataagacaacaattccaagaaataatgcttcagttt
tccatggatcaattcagttcagaaggatctcctgaagatggaaaaaatttggatagcatt
ctagtatcaatcagagatcttgaaattaccccagaaaagattagagagtttcttccaagg
gttaattgggatcagttggcttcctcgtatgttgcaggtcgctctggtgcagagtgtgaa
gcacggtggctgaatttcgaagatctgttgataaatcaaagtccatggaccatcaaagag
gataagaatctcttgttaaatgtccaggagaagggggtcactaactggtttgatattgca
gtatcattgggaacgaataggactccatctcagtgtctatctcgcttccagaggagttta
aatgcgcgcatattgaagagggagtggaccaaggaggaggatgctcaacttcgcattgct
gtagaaacttatggtgaaagagattggcagtctgtggcttgtactttggaaggacgagct
ggtactcaatgctctaacagatggaagaaaacccttcatcctgccatacgaagggttggg
aggtggactctggatgaagacaaacgcctgaaagtagctgtaaagctttttggtccaaag
aaatgggacaaaatagctcaatttgtgccaggtagaactcaagtgcagtgtagagaaaga
tgggttaattgtttagatccttctatgaatcgggatgaatggactgaagaagaggatttg
aggttaaaagcagcaattgaagaatgtggatattgctggtctaaggttgctgaacgtctc
ccacaaagaactgataatcagtgtttgaggagatggaaggtgttggttccacatgaagtg
cctttgttacaggcggctaggaggatgcagaaagctgctcttataagcaactttgtagat
cgtgagtcagagcggccagcacttggcccaaatgattttgttccactggcaattacggga
ccagtatctgatcctgaaaagatggatcaatctaggaaacgtaagagaaagttaaggagg
gaagaatctcagatggaaaaagttgctgcacctggtaatgcttcaaagaagattagatca
aacaggagtaggaaaaaggtgcaaatttcttccaaggaagtgccagagatacctgatggc
actcaggttggcaacttaggtggaagtcgttctgttgtgactgagacaacaatggaatac
tgttcagaaaataacagacatgctgaacgaggtcaagatcatccatcatctaattctaat
ttgacaccattaatgacaaccagctttcaaggggttgattccggtcagaaccagcagctt
cctgacttgcatcctaagggacgtaagcctgtggacagagatggaaacagcaagagtctt
ctcctgtcaccccctgaaaacttggatgctggaataataaatggtgacgtttctcagacc
tttcacccgaacagtaccacatcaagtaagaaaagaagagctcataagcagcattctagg
aagaacatatgtgctaaatcaagtgaagggagttctgtgttatcagaaactactattgat
gctagtgcgttggttaatgattatctggattcaaatttagtgacaaccaatgaagaggac
aacatacttggtcagcgtgatgctcctggcaagaagagggtacccaaactacattcagag
agttcagaatggacaggtagccttgactgtctgctgccgccccatgagaattcagaatta
agagtaactagtactgaaatcatgaacaaatcctctttatttgggacccctacaaatgag
aagaggaaggcttttaagcttccatgcaggaggaaaataagaaatgaagaaccatcaagg
aaagaccaatgttttgctgctgttccttgtcagcaggataccagcaaaaaatcaaaagcc
agaggcaaatcttgttctaagaaggttttagaaacgaaaaatgaagatgacgttgtgctt
gcctccttccttagggataaatcaaagaagaaaagacttaaagttgcacaaaatgctgat
caggcttgctcatcctccagtatgataacgaggcctgaggtgctctccagagtagatcaa
cctagcaatggtaataaattgtcctctgctgtgcgcaatagtgaaggacagacatgctcc
catggcagaagttcagagaacggtttatcatgtgatatgtacgcacatcaatcaaatcat
atgcagacagagcgctgtgagttagatgtgaacaatcgtggcatattcgctcccatggaa
ggagtgagagaaccaggaagcatcgaccaggaagctgttcttgagcccggtgacatttct
cctgctggaagtggttctagggttaacacccactcccattcaagaaaggggccgcagctg
cattccaaaggggcagaacaaccgcgcaatgatacaggtccagacaagttgtcatgttct
gtaaagaactcaattggatcaagtagcaagccaactatcataggcaatgacattgagcca
ggtggacggtccagccactctccatcagccagtggggaagccttaaagtactataaaaga
cgttcaaaacgctga
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