Populus trichocarpa (black cottonwood): 7462528
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Entry
7462528 CDS
T01077
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7462528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7462528
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
7462528
Prokaryotic type
Archaeal type
TFB
7462528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
RB_B
Motif
Other DBs
NCBI-GeneID:
7462528
NCBI-ProteinID:
XP_002322134
LinkDB
All DBs
Position
15:complement(9312552..9317495)
Genome browser
AA seq
311 aa
AA seq
DB search
MEDSYCPDCKRLTEIVFDHSAGDTICSECGLILEAHSVDETSEWRTFSNESSDHDPNRVG
GPLNPLLADGGLSTTISKTNGGSNELLSCSLGKWQSRGANPDRNRIQAFKSIAAMADRLG
LVTTIKDRANEIYKKVEDQKPLKGRNQDAILAACLYIACRQENKARTVKEICSVVNGTTK
KEIGRAKEFIVKHLEVEMGHSMEMGTIHAADYLRRFCSNLGMTNQAVKAAHEAVQKSEEL
DIRRSPISIAAAVIYIIIQLSDDKKPLKDISVVTQVAEGTIKNSYKDLSPHLSQIIPSWF
AKEEDIKNLHS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcatactgcccggactgcaagcgattgacagagatagtgttcgaccactcg
gcaggagacaccatctgctctgaatgtggtttaattttggaagcccactctgtggacgag
acatcagagtggcgaactttctctaacgagtcctctgatcatgaccctaaccgtgttggt
ggcccacttaaccctcttcttgccgacggtggtctttccactaccatttctaaaacaaat
ggtgggtccaacgagcttttgtcctgctctcttgggaaatggcagagccgtggcgccaat
cctgatagaaaccgtattcaggctttcaagtctattgctgccatggccgacaggttgggg
ctggttacaaccataaaggatcgagctaatgaaatatataagaaggtagaggatcaaaaa
cctcttaaaggacgaaatcaagatgccattttagctgcttgtctctatattgcatgtcga
caagagaacaaggcccggactgtaaaagagatttgttctgttgtcaatggaaccacgaag
aaagaaattggacgagcaaaagagtttattgtgaagcatctggaggtagagatgggtcat
tcaatggaaatgggaaccatacatgctgcagactatctgagacgcttttgttccaatctg
ggaatgacgaatcaagcagttaaagctgcccatgaagctgtccagaaatctgaggagctt
gacataaggaggagcccaatatcaattgcagcagctgttatttatatcataattcaacta
tcagatgataagaagcctcttaaagatatttcagttgtaactcaagtggctgaaggtacc
atcaagaactcgtacaaggatctttctcctcatttgtctcagataatacccagctggttt
gccaaggaagaagatatcaagaatctgcactcgtaa
DBGET
integrated database retrieval system
