Populus trichocarpa (black cottonwood): 7462629
Help
Entry
7462629 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A
KO
K03066
26S proteasome regulatory subunit T6
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7462629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7462629
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
7462629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
nSTAND3
AAA_lid_PRS2_C
PRS7_OB
AAA_22
RuvB_N
TIP49
AAA_28
ABC_tran
AAA_33
NPHP3_N
AAA_3
PhoH
Mg_chelatase
AAA_14
OapC
AAA_18
Parvo_NS1
ATPase
AAA_24
AAA_17
RNA_helicase
DUF815
IstB_IS21
AAA_19
AAA_7
AAA_25
DUF5906
TsaE
Sigma54_activat
bpMoxR
Zeta_toxin
AAA_11
Motif
Other DBs
NCBI-GeneID:
7462629
NCBI-ProteinID:
XP_002315825
UniProt:
A9PG47
LinkDB
All DBs
Position
10:complement(12149141..12152740)
Genome browser
AA seq
426 aa
AA seq
DB search
MATVGVERKQQQQTESTMTMIAEESCSAKTGAVRQGEGLKQYYLQHIHELQLLVRQKSHN
LNRLEAQRNGLNSRVRMLREESQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDK
SIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEI
KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ
KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL
DGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNVDSRFDIVKIHSRRMNLMR
GIDMKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMS
LRKLWK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtaggagtggagaggaagcagcagcagcaaacagaatcaacgatgacgatg
atagcggaggagagctgctcggcgaaaacgggagcggtgaggcaaggagagggtttgaag
cagtactatctccaacacatccatgagcttcagctccttgtccgccaaaaatcccacaat
cttaatcgcctcgaagcgcaacgcaatggccttaattccagagtcaggatgcttagagaa
gagtcgcagctacttcaagagcctgggtcatatgttggtgaagttgtcaaagtaatgggg
aagaacaaggtgttagttaaggttcatccagaggggaagtatgttgttgatattgataaa
agtattgatatcacaaagatcactccatcaacaagggttgcccttcgcaatgacagctat
gttcttcacttgatcttgccaagcaaagtggatcctttggtcaacctcatgaaggttgaa
aaagttccagattccacctatgacatgatcggtggtcttgatcaacaaattaaagagatt
aaggaggtcattgaacttccaatcaaacaccctgaattgtttgagagtcttggaattgct
caaccaaagggtgttctgctttatggacctcctggcacaggaaaaactctactggctagg
gcagtggctcatcacactgactgtactttcatcagggtttctggttctgaattagttcag
aaatacattggagaaggctctagaatggtcagagagctttttgttatggcaagagagcat
gctccatcaatcattttcatggatgaaattgatagtattggatccgctcgaatggaatct
ggcagtggcaatggtgacagtgaggtgcagcgtactatgctggagctcctcaatcagctg
gatggatttgaagcatcaaacaagatcaaggttttgatggctacaaatcggattgatatt
ctggatcaagctctccttaggccaggaagaattgacaggaagattgaatttccaaatccc
aacgtggattcacgttttgatatcgtgaaaatccattcaagaaggatgaatttaatgcgt
gggattgatatgaagaagatagctgagaagatgaatggggcatctggtgcagagctcaag
gcggtgtgcactgaggccggaatgtttgctctaagagagaggagggtccatgttacacaa
gaagattttgagatggctgtagcaaaggtcatgaagaaggagacagagaagaacatgtct
ttgcggaagctctggaaataa
DBGET
integrated database retrieval system
