Populus trichocarpa (black cottonwood): 7462634
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Entry
7462634 CDS
T01077
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7462634
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
7462634
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
7462634
NCBI-ProteinID:
XP_024465038
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Position
10:12223706..12227759
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AA seq
547 aa
AA seq
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MAAASSSAPFFGRAREEHQNQIIQQHSSTATSSTVPTTGPQKKRRNQPGTPNPDAEVIAL
SPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKRKVYLCPEPTCV
HHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALAQESARHPTSLNTIGSHLYGNNHMSLGFSQVGSQISHLQDHH
PSGNNMLRLGSAGAANFEHLIPPPNPPSMPMMPPSGFFMGDANQGPFPNKSLHGLMQLPD
LQSNTNNPSSASNLFNFGFFSNNSNTGRTSNNDNANTGSTTTNLASPGLLNATQFNNVNG
AGQRTSVFPTNMSGDHVGSAMSSFFNTSMQQENITPHVSATALLQKAAQMGSTTSSNSPS
GLLRSLGSSSTTGAKSIRPLVSTNFGSSFSNANVGESLETHMESESQLQGLMNSLANGSS
SIFGNEQDNSYTGFDSSSFSKADEGNMHQGLAGSDKLTLDFLGVGGRVRNIGGGFPQRQQ
QNGINNI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcttcgtcatctgcacctttcttcggccgggcaagggaagaacatcaaaac
cagataatacaacagcattcttcaacagccacttcctctacagttccaaccacaggacct
caaaagaagagaagaaatcaacctggaacaccaaatccagatgcagaagtgatagcacta
tctcccaagactctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttc
caaagggagcaaaacctacagctccacagaagaggacacaacctgccttggaagctaaag
cagaagactacaaaagaagtgaagaggaaggtgtatctgtgtcccgagcccacatgtgtt
caccatgatccttctagggctcttggtgaccttactggcataaaaaagcactactttaga
aagcacggtgagaagaaatggaagtgtgagaaatgctcaaaaagatatgctgttcaatct
gattggaaagcccattctaagacttgcggtactagagaatacagatgtgactgtggcact
cttttctcaaggcgtgatagttttatcacacatagagctttttgtgacgcactagctcag
gaaagtgcaaggcatcctaccagcttaaatactataggaagtcatctgtatggaaataac
cacatgagcttaggcttctctcaagtgggttcccaaatttcccatttacaagatcaccac
ccatctggtaataacatgttacggctgggcagtgctggggcagccaatttcgagcatcta
atccctccacctaaccctccttcaatgcccatgatgcctccatctggtttcttcatggga
gatgcaaaccaagggccatttccaaacaaatctttacatgggctaatgcaacttcctgat
cttcaaagcaacactaacaacccctcctcggcttccaatctgtttaacttcggcttcttt
tcaaataatagtaacacaggccgtacaagtaacaatgacaatgccaacactggaagcaca
accacaaacttagcgagtcccggattgttaaatgctacccagttcaacaacgtcaatggt
gctggccaaaggacatcagttttccccaccaacatgagtggtgatcatgttggatcggct
atgtcttcctttttcaatacttcaatgcaacaagagaacatcacaccgcatgtgtctgcc
actgcattgcttcaaaaagcggctcagatgggttcaactactagcagcaacagtccaagt
ggtttactgagaagcttggggagttcttcaacaactggtgctaaatctattaggccactt
gtttccaccaactttggcagcagtttcagcaatgcaaatgtaggtgaaagcttagaaaca
cacatggaaagtgaaagccaacttcaaggattgatgaattctcttgccaatggaagctca
tcaatttttggaaatgaacaggacaacagctacactgggtttgatagctcaagttttagc
aaagcagacgaaggaaatatgcatcaaggtcttgctgggtcagataaactgaccttggat
tttttgggtgttgggggcagagtaagaaacattggtggagggtttccacaaagacagcaa
caaaatggcatcaataatatataa
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