Populus trichocarpa (black cottonwood): 7462666
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Entry
7462666 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-8
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7462666
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7462666
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
OVT1
DUF4522
Motif
Other DBs
NCBI-GeneID:
7462666
NCBI-ProteinID:
XP_024466831
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Position
10:complement(12625371..12629185)
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AA seq
392 aa
AA seq
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MVKSSESGVAPFLKKCYEMVDDESTNSIISWSQTNDSFVIWDMTEFSVHLLPKYFKHSNS
SSFVRQLNIYGFRKIDTDQWEFANDGFIRGQKHLLKNICRRKNSQGTDNRKSVQQQDNSI
EHCENVENVGLWKEVESLKTGRNAVTQELVKLRQHQETADNKLLLLRDRLQGMEKNQQQM
LSFLVMAMQSPGFLAQLLNKKENNWRIAEPGSIVEQGADDAEQLASEGMIVRYQPPVDEM
FEPVHAPPIGPENPRESNPSSDGMKDFFVSPDFMELLMDENLGFENHTSFGLPELADDGS
WEQLLLANPFIENIKDTKPGSEESTDPETDTGTTIVGTQLERSQSFEYLIEMMEKSNDLE
NKATDEGPHFEKSQKLEILTEQMGLLASEPNH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaatcaagcgaaagtggggtggctcctttcttgaagaaatgctatgaaatggtt
gatgatgaatcaacaaattcgataatctcatggagccagaccaatgacagctttgttata
tgggacatgactgaattctctgtccacttactgcccaagtacttcaagcacagcaattct
tctagttttgtcaggcagctcaatatctatggatttagaaaaattgatacagatcagtgg
gaatttgcaaatgacggatttatcagagggcagaaacatttgttaaagaatatctgcagg
aggaaaaattctcagggcacagacaatcgaaagtcagtgcagcagcaagacaactccatt
gagcattgtgaaaatgttgaaaatgtgggtctctggaaggaagttgagagcctgaagaca
ggtagaaatgcagttacacaggagttggttaagctcaggcagcaccaggaaactgcagac
aataagttgctcctgttgagggatcgccttcaaggaatggaaaaaaatcagcagcagatg
ctgtcttttttagtgatggcaatgcaaagcccagggtttctagctcagctactaaacaaa
aaggaaaataattggcggatagctgagccaggaagcatagtggagcagggtgcagatgat
gctgagcagttggcttctgagggaatgatagtaaggtaccagccaccagtggatgagatg
ttcgagcctgtacatgcaccgccaattggtccagaaaatccacgagaatctaacccatct
tccgatgggatgaaagatttttttgtgagtccagattttatggaacttcttatggatgaa
aatttgggttttgaaaatcatacctcgtttggtttaccagaattagcggatgatggttct
tgggaacaactgcttttagccaatcctttcattgagaatattaaagacaccaaacccggt
tctgaagagagcactgatcctgaaactgataccggaacaacaattgttggaacgcagctg
gagagatcccaaagttttgaatatttaatagaaatgatggagaagtccaatgacttggag
aacaaagcaactgatgaaggacctcactttgagaagtctcagaaattggaaattctaact
gagcagatgggtcttttggcttcggagccaaaccactaa
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