KEGG   Populus trichocarpa (black cottonwood): 7462811
Entry
7462811           CDS       T01077                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03250  Viral life cycle - HIV-1
pop03272  Virion - Hepatitis viruses
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7462811
   03272 Virion - Hepatitis viruses
    7462811
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7462811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7462811
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7462811
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    7462811
Exosome [BR:pop04147]
 Exosomal proteins
  Proteins found in most exosomes
   7462811
SSDB
Motif
Pfam: UEV Vps23_core UQ_con
Other DBs
NCBI-GeneID: 7462811
NCBI-ProteinID: XP_002303959
UniProt: B9GXA7
LinkDB
Position
3:complement(19444926..19448248)
AA seq 401 aa
MVPPPSSNHQAIQQFLSSVLSQSGTSALPYSEDTKWLIRQHLLSLTTTSPSLEPKTATFT
HNDGRTVNLLQADGTVPITFISVTYNIPVIIWLFESYPRHPPCVYVNPTRDMIIKRSHPF
VNPSGLVSIPYLQNWIYPSSNLVDLARELSSVFGRDPPLFSQRPKPNPNPNYHPNQSSLG
SVGNTGGGGGYPRPIVRPPQYPPYGSGGAVGKVEAEDAAEVYKRNVIDKLVENVHGDMLQ
LSKTREAEMESWFSAQSVLRGREEEFNKGLKEMRDKMEGLELHLQVVLMNTDVLEAWVRE
NKGKLKGGSEDIDVDNAFECVDVLSKQMLECTAVDMAIEDAVYSLEKAVQEGAMPFDQYL
RNVRLLSREQFFNRATAAKVRAAQMQAQVAGMAARAPRYAT
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggttcctccaccgtcgtcaaaccaccaagcaatccaacaattcctctcctccgtcctc
tctcaaagcggcacttccgcccttccttactccgaagacaccaaatggctcatccgccaa
cacctcctttcactcaccactacttccccctctctcgaacccaaaaccgctaccttcact
cacaacgatggtcgcaccgtcaatcttctccaggctgacggcaccgttccgatcactttc
atatctgtcacttataacatcccggttatcatctggcttttcgaatcttaccctcgccac
cctccttgtgtttacgtgaaccccacacgcgatatgatcatcaaaagatctcatcctttt
gtcaatccctcggggctcgtttcgatcccttatttgcagaattggatctaccctagttct
aatttggttgatttggctcgcgagctgagctcggtttttgggagggatcctcctctgttt
tcccaacgccccaaacctaaccctaatcccaattatcatccaaatcaatcgagtcttggg
tcagtgggtaacacgggaggtggtggtgggtatccgagaccgattgtcagaccaccacag
tatccgccgtatggtagtggtggtgcggtggggaaggtagaggcggaggatgcagcggag
gtttataaaagaaatgtgattgataagcttgtggagaatgttcacggggatatgttgcag
ttgagtaaaacgagggaggcggagatggaaagctggtttagcgcacaatctgtgttgagg
gggagagaggaggagtttaataaagggttgaaagaaatgagagataagatggaagggttg
gagttgcatttgcaagttgttttgatgaatacggatgttttggaagcatgggttagggaa
aataaggggaagttgaaagggggctcggaggatattgacgtggataatgcttttgagtgt
gtggatgttttgtcgaagcagatgttggagtgcacagcggtggacatggcaattgaggat
gcggtttattctttggagaaagcagtgcaagaaggggcaatgccatttgatcaatatttg
aggaatgtgaggttgttgtctagagagcagttttttaacagggcaactgcagcgaaagtt
agggctgcacaaatgcaggctcaggttgctggtatggctgccagggcaccacgttatgct
acctga

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