Populus trichocarpa (black cottonwood): 7462811
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Entry
7462811 CDS
T01077
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03250
Viral life cycle - HIV-1
pop03272
Virion - Hepatitis viruses
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
7462811
03272 Virion - Hepatitis viruses
7462811
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7462811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7462811
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7462811
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
7462811
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
7462811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Motif
Other DBs
NCBI-GeneID:
7462811
NCBI-ProteinID:
XP_002303959
UniProt:
B9GXA7
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Position
3:complement(19444926..19448248)
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AA seq
401 aa
AA seq
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MVPPPSSNHQAIQQFLSSVLSQSGTSALPYSEDTKWLIRQHLLSLTTTSPSLEPKTATFT
HNDGRTVNLLQADGTVPITFISVTYNIPVIIWLFESYPRHPPCVYVNPTRDMIIKRSHPF
VNPSGLVSIPYLQNWIYPSSNLVDLARELSSVFGRDPPLFSQRPKPNPNPNYHPNQSSLG
SVGNTGGGGGYPRPIVRPPQYPPYGSGGAVGKVEAEDAAEVYKRNVIDKLVENVHGDMLQ
LSKTREAEMESWFSAQSVLRGREEEFNKGLKEMRDKMEGLELHLQVVLMNTDVLEAWVRE
NKGKLKGGSEDIDVDNAFECVDVLSKQMLECTAVDMAIEDAVYSLEKAVQEGAMPFDQYL
RNVRLLSREQFFNRATAAKVRAAQMQAQVAGMAARAPRYAT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggttcctccaccgtcgtcaaaccaccaagcaatccaacaattcctctcctccgtcctc
tctcaaagcggcacttccgcccttccttactccgaagacaccaaatggctcatccgccaa
cacctcctttcactcaccactacttccccctctctcgaacccaaaaccgctaccttcact
cacaacgatggtcgcaccgtcaatcttctccaggctgacggcaccgttccgatcactttc
atatctgtcacttataacatcccggttatcatctggcttttcgaatcttaccctcgccac
cctccttgtgtttacgtgaaccccacacgcgatatgatcatcaaaagatctcatcctttt
gtcaatccctcggggctcgtttcgatcccttatttgcagaattggatctaccctagttct
aatttggttgatttggctcgcgagctgagctcggtttttgggagggatcctcctctgttt
tcccaacgccccaaacctaaccctaatcccaattatcatccaaatcaatcgagtcttggg
tcagtgggtaacacgggaggtggtggtgggtatccgagaccgattgtcagaccaccacag
tatccgccgtatggtagtggtggtgcggtggggaaggtagaggcggaggatgcagcggag
gtttataaaagaaatgtgattgataagcttgtggagaatgttcacggggatatgttgcag
ttgagtaaaacgagggaggcggagatggaaagctggtttagcgcacaatctgtgttgagg
gggagagaggaggagtttaataaagggttgaaagaaatgagagataagatggaagggttg
gagttgcatttgcaagttgttttgatgaatacggatgttttggaagcatgggttagggaa
aataaggggaagttgaaagggggctcggaggatattgacgtggataatgcttttgagtgt
gtggatgttttgtcgaagcagatgttggagtgcacagcggtggacatggcaattgaggat
gcggtttattctttggagaaagcagtgcaagaaggggcaatgccatttgatcaatatttg
aggaatgtgaggttgttgtctagagagcagttttttaacagggcaactgcagcgaaagtt
agggctgcacaaatgcaggctcaggttgctggtatggctgccagggcaccacgttatgct
acctga
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