Populus trichocarpa (black cottonwood): 7462827
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Entry
7462827 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RSL1
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7462827
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
7462827
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
7462827
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
zf-C3HC4
zf-C3HC4_2
Rcat_RNF216
zf-RING_UBOX
zf-RING_5
IBR_2
zf-RING_2
RING_XB3-XBAT31
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
7462827
NCBI-ProteinID:
XP_002303968
UniProt:
B9GXM0
LinkDB
All DBs
Position
3:complement(19240513..19242037)
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AA seq
307 aa
AA seq
DB search
MAQERISSFDLDFVDDFYFSALFDEEQECGGGGEIFEVSDDRYAEELQFQEALMGSVIVS
RMKNNGPISSMMIEGTPVLLRISDQPMHMEINQSGAVESSLRFCDICAERKQNDQMFKTE
SCVHSFCNDCISRYVAAKVQDGTRIVTCPGLNCRAVLDLVTCRPILTSVVIDLWEDALCE
EVINVSQRFYCPFKDCSALLIDDNEGEAIIESECPFCHRLFCALCSVPWHSGIECEEFQR
LNEDERGREDLMLRELAKDKKWSRCPQCKFYVERTEGCPHMICRCGLQFCYGCGAEWIGD
HGGCARE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaacgcatctcctcctttgatcttgattttgttgacgatttttacttctca
gcactctttgatgaagaacaagaatgtggaggtggaggagaaatctttgaagtttcagat
gacagatatgcagaagagttgcagttccaggaggctttgatgggttctgtcatcgtttct
cgaatgaaaaacaatggcccaatatcgtcgatgatgatagaaggaaccccagtattgcta
cgtatttctgatcagcctatgcacatggagatcaaccagtcaggagccgttgagtcttct
ttacgtttctgtgatatttgtgctgagagaaaacagaatgatcaaatgttcaaaaccgag
agctgtgttcactcattttgtaatgattgcataagcagatatgtggccgccaaggtccaa
gatggcactagaatagttacttgccctggattgaattgcagggctgtcctggatttggtc
acctgcaggcctatactgactagtgtagtgattgatctttgggaggatgcattatgcgaa
gaggtgattaatgtatctcaaagattttattgtcctttcaaggattgttcagctttgttg
attgatgataatgaaggcgaagcaattatagaatctgagtgccccttctgccatagattg
ttctgtgctctgtgctctgtgccctggcattctgggattgaatgtgaggagtttcagagg
ctgaatgaagatgaaagagggagagaagatctcatgttgagggaacttgctaaggacaag
aaatggagtagatgtcctcagtgcaagttctatgtggaaagaacagaaggctgtcctcac
atgatctgcaggtgtgggcttcagttttgctatggatgtggagccgaatggatcggagat
catggtggatgcgctagggaataa
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