Entry |
|
Name |
(RefSeq) ubiquitin receptor RAD23b
|
KO |
K10839 | UV excision repair protein RAD23 |
|
Organism |
pop Populus trichocarpa (black cottonwood)
|
Pathway |
pop04141 | Protein processing in endoplasmic reticulum |
|
Brite |
KEGG Orthology (KO) [BR:pop00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7462834
09124 Replication and repair
03420 Nucleotide excision repair
7462834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:pop03051]
7462834
03400 DNA repair and recombination proteins [BR:pop03400]
7462834
Proteasome [BR:pop03051]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
7462834
DNA repair and recombination proteins [BR:pop03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
7462834
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:complement(19170821..19176233)
|
AA seq |
372 aa
MKLTVKTLKGSHFEIKVHPTDTIMGVKKNIEDAQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKSKTGTAGTSSTQPVSTPPTTTPTSISTPAPDAQALDSKSASASD
SATANAQSDTYGQAASNLVAGSNLEQTLQQIMDMGGGTWDKETVTRALRAAYNNPERAVD
YLYSGIPETAEVAVPVARFPADQATETGAAPAAPAPAFGAPNSSPLNMFPETISGGGGGA
GGGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRIIQEHHAEFLQLIN
EPLDGSEGDIFDQPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEQLAA
NYLLENAGDFED |
NT seq |
1119 nt +upstreamnt +downstreamnt
atgaagctcaccgtcaagactctgaaaggcagccatttcgaaattaaggttcatcccacc
gacactattatgggtgtcaagaagaatattgaagatgcgcaaggaaaagacaattaccca
tgtggacaacaattgttgattcataatgggaaagtattgaaagatgagactactttagct
gataacaaggttactgaagatggttttcttgttgtcatgcttagcaagagtaaaacaggc
acagctggtacttcatccacccagcctgtttctactccacctaccaccacaccaacttca
atttcgactcccgcacctgatgctcaagcattggactcaaagagtgcatctgcttctgac
tcagcaacagccaatgcacagagtgatacttatggtcaagctgcttccaatttagttgct
ggtagtaatttggagcagactcttcagcaaataatggatatgggaggtggaacctgggat
aaagaaacagttactcgtgcacttcgagctgcctataataacccggagcgggcagtggat
tacttgtactcgggcattccagaaacagcggaagtcgctgtcccagtggctaggtttcct
gcagatcaggctactgaaacaggtgcagctccagctgcccctgcacctgcatttggagca
cctaattcatctccattgaatatgtttcctgagacaatttctggtggtggaggtggtgct
ggtggcggacttggctctcttgatttccttagaaacaatcaacaatttcaagcattgcgt
tcaatggttcaagcaaatccacaaatcttgcagcccatgcttcaggagcttgggaagcaa
aacccccagcttttgagaattattcaagagcatcatgcagagtttcttcagttaataaat
gaacctcttgatggttctgaaggggatatatttgatcagcctgaccaagatatgccccat
gcaatcaatgtgaccccagctgaacaagaagctattgaacggctcgaggcaatgggtttt
gatagagcccttgtcatagaagcattcttggcttgtgatcgcaatgagcaactggcagcc
aactatctattggaaaatgctggagattttgaagattga |