| Entry |
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| Name |
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X2
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| KO |
| K03129 | transcription initiation factor TFIID subunit 4 |
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| Organism |
pop Populus trichocarpa (black cottonwood)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pop00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7462851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pop03021]
7462851
03036 Chromosome and associated proteins [BR:pop03036]
7462851
Transcription machinery [BR:pop03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
7462851
Coactivators
SAGA/TFTC/STAGA complex
7462851
Chromosome and associated proteins [BR:pop03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
7462851
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(9107300..9114699)
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| AA seq |
943 aa
MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDVSTSQPSDSSSVLSHENNQSSSQ
QFPNWPTVGQNDNASNTEELDAKSVEQQHHQEQQSSAMETKQHVPNADNQQQKGDVPQEP
THPPVLQKKFQDDIKQELVEQAPVQTPQSIGAQSSEQNPTPKSEPDKMQISDVDSQFLNF
QKIGNQQTAGTDQAGNQKNSKQIPFVLLLPALKPHLDKDREMQLQTLFNKLRKNEIAKDQ
FVRLMRNIVGDQVLRLAVAQLQSQSGSNQSQLQSQAGRQNNVRMPAGISAAQFPDPHHFV
LHPRGSISSEPSRNPPSAVQLQTDSSIVNSQKSKTVEWQPDSLGMQASQLHSSNTSIVNQ
ERERSSISMQGQNKQPQHVHFPPTSFPMYGSSGGNYNQYPGTKVSTSGPSVKPQPHDQQT
RQISHHQNMGVTQVGGPPHNMISTPKFERQNSANDPSRVHSGSVSHYTNKSAVQQNSVPW
QAPPNREQSPAPFSSVNYVKPGSLEQAGEQQNKPQLLSPQVLPPAPVEQGNAISGNLKDQ
SLDKQSSKVVFSTSGGMVPPNSVSPSIATQLDPNGQVSSRNPSVASPAGVSARTPPKKHS
VGQKKPFEALGSSPLASSKKQKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGTKED
SRVSEASRRVVQEEEERLILQKKPLQKKLGEIMAKCGLKNIGNDVGRCLSLCVEERMRGL
ISDLIRLSKQRVDAEKPRHQTLITSDVRQQIMTMNRKAREEWEKRQAEAEKLQKVNDPEG
ENGGEGDKEKDEGRVKSVKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQK
REVGMEGASSSQPVNDVNRNPQSPSGRNVKENLEAEKRSPAVPSASGAVRKFGRNQAIVP
QTKVVRTITVKDVMAVLEREPQMSRSTLIYQLYERIRSDAAPE |
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| NT seq |
2832 nt +upstreamnt +downstreamnt
atggaccctaacataatgaagcttcttgaagaagacgaggacgaaaccatgcattccggt
gctgacgtggaggcttttcaagctgccttaaatcgggacatcgggggtgatgtctccacc
tctcagccgtctgattcgagttcggttttgtcccacgaaaacaatcaaagttccagtcaa
caatttccaaattggccaactgtggggcaaaatgacaatgccagtaacaccgaagaactt
gatgcaaaaagtgtcgaacaacaacatcatcaggagcagcagtcatctgcaatggagaca
aagcagcatgtacctaatgctgataaccaacaacaaaagggggatgtcccgcaggaacca
acccacccaccagtgcttcagaaaaaattccaagatgatattaaacaagaacttgtggaa
caagctcctgtccagactcctcaatctatcggggcgcagagttctgagcaaaatcctacc
ccaaaatccgagcctgataaaatgcaaatttcagatgttgattctcaatttttaaatttt
cagaagataggcaatcagcaaactgcaggcacagatcaggctggtaaccaaaagaatagc
aagcagataccctttgtattattgttgcctgccttgaaacctcatcttgataaagacaga
gagatgcagctgcaaactttatttaataaactgaggaaaaatgaaattgcgaaagaccaa
tttgttagacttatgagaaatattgttggggatcaagtgctcaggttggcagttgcacaa
ctgcaatcacagtcaggttccaaccaatcccagttacagtctcaagctggtcgccaaaac
aatgtgagaatgcctgctggaatcagtgctgctcaatttcctgatccacatcattttgta
cttcacccaaggggatctatttcttcagaaccatctcgtaatcctccgtcagcagtccaa
ttgcagactgattcaagcattgtcaattctcagaaatccaaaacggtagaatggcagcca
gattctcttggaatgcaagctagccagttgcattcttccaataccagtattgtcaatcaa
gaaagggagcgatcttctatttcaatgcaagggcagaacaaacagccacaacatgtgcac
tttccaccaacttcctttccaatgtatggaagcagtggtggtaattacaatcaatatcct
gggaccaaagttagtacttcaggaccatctgtgaagccacaaccccatgatcaacaaaca
aggcaaatttcacatcatcagaacatgggtgtgacacaagtaggagggccaccacataac
atgataagcacgccgaagtttgagaggcaaaattctgctaatgatcctagtagagtgcac
agtggttctgtttcccattatacaaacaaatcagctgtacaacagaattcagttccttgg
caagcaccaccaaatagagagcaaagtcctgctccattctcatcagtgaattatgtaaaa
ccgggctctcttgaacaggctggtgagcagcagaacaaaccccagttgttgagccctcaa
gtgctgcctcctgcacccgttgaacagggaaatgccatttcaggaaatttaaaggatcaa
tctttagacaagcaatcttctaaagttgttttttcaacatccggtggtatggttcctccc
aattctgtttccccttcaattgcgactcaactggaccctaatggccaggtaagctcgcga
aacccatctgtagcttctcctgctggagttagtgcaagaacacctcccaaaaaacattct
gttggccaaaagaagccatttgaagcacttggttcatcgcctcttgcatcaagtaagaag
caaaaggtatctggggctttttctgatcaaagcattgaacaactcaatgatgtcactgct
gtcagtggagttaatctcagggaagaggaagaacaactattttcagggacaaaggaggac
agtcgagtttcagaagcatcacggagggttgtacaggaagaagaagaaaggctgattttg
cagaaaaaacctttgcagaaaaaattaggagagatcatggccaaatgtggtttgaagaac
attggcaatgatgttgggcgatgcttgtccttgtgcgtggaggaaaggatgcgtggactg
ataagtgacctgatcaggctctcaaaacagcgtgttgatgctgagaagccaagacaccag
actctaattacttcggatgttaggcaacagataatgacaatgaaccggaaagctcgggaa
gaatgggagaaaaggcaggctgaagcagaaaagctccaaaaagttaacgatcccgagggt
gaaaatggaggtgaaggtgacaaggagaaagatgaaggtcgcgtgaagtcagtgaaggct
aacaaagaggaggatgataaaatgaggacaacagctgctaatgttgctgctcgagctgct
gttgggggagatgacatgttgtcaaaatggcaactaatggctgaacaagcacggcagaaa
cgtgaagtagggatggagggggcatctagttcccagccagttaatgatgtgaaccgcaat
cctcaatcaccatctggaagaaatgtgaaagaaaatcttgaagcagaaaaaaggagccct
gcagttccttctgcatctggagctgttaggaaatttggaaggaatcaagcaattgtgcct
caaacgaaggtggttcgtactattactgttaaggatgtgatggcggtgctggaaagggaa
cctcagatgtccagatctactctgatctaccaactgtacgagcgaatcaggtctgatgct
gcacctgaataa |
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