Populus trichocarpa (black cottonwood): 7462875
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Entry
7462875 CDS
T01077
Name
(RefSeq) heat stress transcription factor B-4
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7462875
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7462875
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
LcrG
Motif
Other DBs
NCBI-GeneID:
7462875
NCBI-ProteinID:
XP_002301176
UniProt:
B9GNU9
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Position
2:9502546..9504437
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AA seq
364 aa
AA seq
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MALMLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFA
RDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQ
VAINQHHPHSPFGVNGPSFFPFPSRTSISPSDSDEQANNWCDSPPLTSPPRGGVATATVI
GGGGGFNSSVSALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSS
SLLLCGPSPYATTNHVTSNGSLVQKPLNQLLGYYPTTAPTNPKQIPQVHVLINSPTTTSQ
SSLTILEEANNNGCKTKLFGVSLQTKKRLHPEYGSNPGNMETSKARLVLDKDDLGLNLMP
LSRC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatgttagataactgtgaaggcatattactctcattagactcccacaaatca
gtcccagctcctttccttaccaaaacctaccaactggtagatgatccagccactgaccac
atagtttcttggggtgaagatgacactactttcgttgtttggaggccacctgagtttgct
cgtgatctccttcctaactatttcaagcataacaacttctctagctttgtcaggcaactc
aatacctatgggtttaggaagattgtacctgacagatgggagttcgctaatgagtttttc
aagaagggagaaaaacatttactttgtgaaatccatagaagaaaaacagctcagccacaa
gtagccattaatcagcaccacccacattctccttttggtgttaacgggcccagtttcttt
cctttcccaagcagaaccagcatctctccatctgattcagatgagcaagccaacaactgg
tgtgattcacctcctctcacttcaccaccaagaggaggagttgctaccgccacagttatt
ggtggtgggggtggatttaatagttcagtctctgcgttatcagaagataatgaaagacta
aggagaagcaacaatatgctaatgtccgagcttgcgcacatgaaaaagctttacaatgat
attatttactttgtccaaaatcatgtcaagcctgttgctcccagcaattcctactcttct
tctttgcttctttgtggcccatcaccttatgctacaacaaatcatgttacttctaatggt
tctctagtacagaagcccttaaaccagcttcttgggtactatcctacaactgctccaact
aaccctaagcaaatccctcaagttcatgttttgatcaactcacctacaactacttcacag
agctctttgaccattcttgaagaagccaacaacaatggttgcaagacaaagttgtttggt
gtgtcattacaaacaaagaaaagattgcacccagagtatggttcaaatccaggaaatatg
gaaactagcaaggctcgtttggtgttggacaaggatgatttaggattgaatcttatgcct
ctttcaagatgttag
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