| Entry |
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| Name |
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X1
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| KO |
| K12590 | exosome complex component RRP46 |
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| Organism |
pop Populus trichocarpa (black cottonwood)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pop00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
7462927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pop03019]
7462927
Messenger RNA biogenesis [BR:pop03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
7462927
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
18:complement(3443732..3473297)
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| AA seq |
243 aa
MESDRDDGRSPSQLRPLSCARNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
CIEVIWKPKTGQIGKLEKEFEMILKRTLQSICILTLNPNTTTSIIVQVVNDDGALLVCAI
NAACAALVDAGIPMKHLAVAICCCLAEGGYVILDPTKLEEQKMRGFTYLVFPNSVVSVLP
EGSSHVEGEPMEHGIITSVTHGVMSVEEYLKCLERGRAASTKLSDFLRRSLQSQLPSDSS
KAA |
|---|
| NT seq |
732 nt +upstreamnt +downstreamnt
atggagagtgacagagacgatggtcgttctccaagccaattaagacctctctcttgcgct
cgcaatgtacttcaccgtgctcatggctctgccagttggtctcaaggggatacaaaggtc
ttagctgctgtttatggacctaaagctggcacaaagaagaatgagaaccctgagaaggct
tgtattgaagttatttggaagccgaagacaggacaaattggaaaactggaaaaggaattt
gagatgatattgaagaggactttgcaaagtatctgcattttgactctcaatccaaacacc
acaacatcaattatcgttcaggttgttaatgatgatggtgctcttctagtctgtgctata
aatgcagcatgtgctgccctcgtagatgctggaattcctatgaaacatcttgctgttgca
atatgttgttgtttggcagaaggtggatatgttatattggatcctaccaagctggaagag
cagaaaatgaggggattcacatatttagtcttcccaaactctgttgtctctgttctacca
gaaggatcatcccatgtagaaggtgaacccatggaacatggaatcatcacctctgttacc
catggtgtaatgtcagtggaagaatatctcaaatgtctagaacgagggcgtgcagccagt
acaaaattgtctgattttcttaggaggagcttgcaatcacaacttccaagcgactcatct
aaagctgcgtaa |
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