Populus trichocarpa (black cottonwood): 7462934
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Entry
7462934 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7462934
KO
K23562
ER membrane protein complex subunit 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7462934
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
7462934
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
DACNK
Motif
Other DBs
NCBI-GeneID:
7462934
NCBI-ProteinID:
XP_002324236
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All DBs
Position
18:complement(3171225..3177432)
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AA seq
985 aa
AA seq
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MAMAIRSLLIFLCILSITVPTFSLYEDQAGLMDWHQKYIGKVKHAVFQTQKTGRKRVLVS
TEENVIASLDLRHGEIFWRHVLGTNDAIDGIDIAMGKYLITLSSEGSILRAWNLPDGQMW
WESFLQGPSDSKSFLFVSTSTKVDKDNTILVFGKGSLHAISSMHGEIVWKVDFPAESFEV
QEVIQHHDSNTIYVVGFVGFSLFDVYQINAKNGELLKHDSAAFDGGFSGEVSLVSKAKLV
VLDAARSTLLTISFQNGEISFQKTYVSDLVKDFSGMAVILPSKLTGLFAVKTNTATTFIS
VSSEGQLEVVDKINHATVISDALSFSEDRQAFALVQHGDNDIHLNVKQGHDWNSDLLKER
IKLNQQRGFVHKVFMNNYVRTDKSHGFRALIVMEDHSLLLLQQGAIVWSREDGLASIIGV
TTSELPVEKKGVSVAKVEQNLFEWLKGHMLKVKGTLMLASAEDVAAIQGMRLRSSEKSKM
TRDHNGFRKLLIVLTKSGKLFALHTGDGRIVWSVLLNSLRQSEACENPTGINVYQWQVPH
HHAMNENPSVLVVGRCKPSSDAPGIFSFVDTYTGKELKSFGLDHSVAQVIPLPFTDSTEQ
RLHLLIDTSGQAHLYPRAPEAVAIFQLEFSNIYWYSVEADNGVIKGHGLKSNCDGEVANN
YCFGTREVWSIVFPSESEKIITTITRNSNEAVHTQAKVVADQDVMYKYISKNLLFVATVS
PKASGDIGSATPEESHLVVYVVDTVTGRILHRMNHHGSQGPVHAVFSENWIVYHYFNLRA
HRYEMTVIEIYDQSRADNKDVWKLVLGKHNLTSPMSSYSRPEVTTKSQSYYFTHSVKAIT
VTSTAKGITSKHLLIGTIGDQVLAMDKRFFDPRRSVNPTQSEKEEGILPLTDSLPIIPQS
YVTHALKVEGLRGIVTVPAKLESATLVFTYGVDLFFTRLAPSRTYDSLTEDFSYALLLIT
IFVLIAAIFVTWVLSEKKDLRDKWR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcgattaggtctctgcttatctttttatgtatcctatcaattacagtccct
accttttctctttatgaagatcaagccggcctcatggactggcatcaaaagtacataggg
aaagtgaagcacgcagtgttccaaacacaaaaaactggtcgaaagcgtgttcttgtttct
actgaagagaatgttattgcttctcttgatctccgtcacggcgagattttttggaggcat
gttcttgggaccaatgatgctattgatggaatcgatattgccatgggaaaatatcttatt
accctttcatcagaaggaagcattctaagagcatggaaccttcctgatgggcagatgtgg
tgggaatcttttcttcagggaccaagcgactcaaagtcattcttgttcgtttcgacaagc
acgaaagttgacaaggacaacacaatccttgtttttggtaaaggaagtctccatgctatt
tcaagcatgcatggtgaaattgtttggaaggtggattttcctgctgaaagttttgaggtt
caggaagtaattcagcaccatgacagcaatacaatatatgtggtgggatttgttggtttt
tcactgtttgatgtataccaaatcaatgctaagaatggagaactcctaaagcatgacagt
gcagcctttgatggtggcttttcaggggaagtttctttagtttcaaaagccaaacttgtg
gtgctggatgctgcaaggtcaactttgttaacaataagttttcagaatggagaaatcagc
tttcagaaaacatatgtatcagatctagtcaaggatttctcagggatggcagtgatatta
ccttcaaaacttactggtttgtttgctgtgaaaaccaatacagctacaacatttattagt
gtgtcaagtgaaggtcagttggaggtggttgacaaaatcaatcatgcaacagttattagt
gatgctctttcattctcagaggaccgacaagcatttgcattggttcagcatggagacaat
gacattcacctcaatgtgaagcaaggtcatgactggaatagtgatttgctaaaagagaga
atcaagctgaaccagcaaagaggatttgtccataaggttttcatgaacaattatgtcagg
actgataagtctcatggatttagggctttgattgtgatggaagatcattcattgttgctg
ttacaacaaggtgcgattgtctggagtagggaggatggccttgcatcaataataggagtt
acaacgtcagaacttcctgtagaaaagaaaggtgtatctgtggccaaagtggagcagaac
ctcttcgaatggcttaaaggacacatgctgaaggttaagggtacattgatgcttgcaagt
gctgaggatgtagcagccatacaaggcatgaggttgagaagctctgagaaaagtaaaatg
accagggaccataatggattccgaaagctgctcattgttctcactaaatctgggaaactt
tttgccttgcacactggagatggacgaattgtctggtctgtcttattgaactctctacgg
caatcagaagcatgtgaaaatccaactgggattaatgtatatcagtggcaggttcctcat
catcatgctatgaatgaaaatccatctgttctggtagttggcaggtgcaaaccaagttct
gatgcaccaggaatattttcctttgttgatacatacacagggaaggagctgaagtccttt
ggtcttgatcattctgttgcacaagtcattccactcccgttcacagattcaacagaacaa
cgtctgcatctactaatagatacaagtggacaggcacatttgtacccaagagcacctgag
gctgttgccatttttcaacttgagttttcaaacatttattggtactcggtagaagctgat
aatggtgttattaagggacatggattgaagagcaattgtgatggtgaagttgcaaacaac
tattgttttggtaccagagaagtatggtccattgtattcccctcagaatccgaaaagatc
attacaaccataacaagaaattcaaatgaggcagttcatacacaagcaaaagttgttgct
gatcaagatgtgatgtacaaatatatatcaaaaaatttgctttttgtggccactgtctca
cctaaagccagtggagatattggatcagccacaccagaagaatcacatttggtcgtctat
gttgttgatactgttactggtcgtatattgcatcgaatgaatcatcatggctcgcagggt
cctgtccatgcagtttttagtgaaaattggattgtctaccactacttcaatctcagagca
cacagatatgagatgacagttattgaaatttatgaccagtctcgggcagacaacaaagat
gtttggaagcttgttcttggaaagcacaatctcacttcacctatgtcttcatattcacga
ccagaggtcacaacaaagtcacaatcttactatttcacccattctgtcaaagcgataaca
gttacgtcaactgctaagggtatcacttcgaagcatcttcttattgggacaattggtgat
caggtattggcaatggataagcgtttctttgaccctcgtcggtcagttaaccccacacaa
tcagagaaggaagaaggaattttacctcttacagattcattgcctatcattcctcaatca
tatgttacacatgcccttaaagtggaggggctccgaggcatagtgacagtgcctgccaag
ctggagtcagccacccttgtctttacatatggtgtggatctcttcttcactcgccttgca
ccctcaaggacctatgattctcttacagaggattttagctatgctctgctgctcataacc
attttcgtacttatcgcggcaatctttgtgacatgggttctgtccgagaagaaggatctc
agagataaatggaggtga
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