KEGG   Populus trichocarpa (black cottonwood): 7462983
Entry
7462983           CDS       T01077                                 
Name
(RefSeq) probable polygalacturonase At3g15720
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00040  Pentose and glucuronate interconversions
pop01100  Metabolic pathways
Module
pop_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    7462983
Enzymes [BR:pop01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     7462983
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 7462983
NCBI-ProteinID: XP_052305023
LinkDB
Position
18:2121583..2124903
AA seq 421 aa
MQDVYFSFLILCIAASSFGIGHGQKVFNVVDFGAIGDGQIDDTNAFLSAWQALCGDDVAQ
GTPSLQIPEGKTFLLQPVKFQGPCKSVFVHVQVKTFQVQGKIIAPNTIEEWNNCQADYWI
GFVGVANLNMYGSGLIDGQGSKAEHICFRIFYTVEVSFSVKLLKKQSRTLQALNFEKCDD
LQLSGLTHVDSPKGHIGITDCNGVLISNLNIAAPENSPNTDGIDMARSTNVHIQDSMIAT
GDDCVAINGGCSYINITNIACGPGHGISVGSLGKDGQYDTVEEVHVRNCSFTGTQNAARI
KTWQGGSGYARKISYEQITLVASKNPIIIDQYYCDGVNNCRNSSTALQVSDVTYSGFQGT
SVDEEAIRLDCSDRGCINIVMDNINITSLDPGKTTYAYCEHTSGTSWFTAPYVPCLSVSG
Y
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggatgtttatttcagctttttgatcctttgcattgctgcgtctagttttggcatt
ggacatggccaaaaagtttttaatgtggttgattttggtgccataggagacggccagatt
gatgataccaatgcctttttatctgcatggcaagctttgtgtggagatgatgtagctcag
ggtacaccttcccttcagatacctgaaggaaaaacatttttactgcagcctgtgaaattc
cagggtccttgcaagtctgtatttgttcatgtccaggtaaaaacatttcaggttcaaggg
aaaatcatcgctcccaacaccattgaggaatggaataactgtcaagcagattactggata
ggctttgtaggcgtagccaatctcaatatgtatggatcaggactaattgatggccagggt
tcgaaagctgaacatatttgttttcggattttttacaccgtcgaggtttcattttctgtc
aaattactgaaaaagcaatcgagaacgttgcaggctctgaacttcgagaaatgtgatgat
cttcagcttagtggtctaactcatgttgacagtccaaaaggccatataggaatcactgat
tgcaatggtgtccttatctctaatcttaatatcgctgcacctgaaaacagccccaacacg
gatggaatcgacatggctagatcgaccaatgttcatattcaagattctatgatagcaact
ggtgatgactgtgttgctatcaatggtggctgctcttatatcaacatcaccaacattgcc
tgtggaccaggccatggcattagcgtaggaagtttaggaaaggatggacagtatgataca
gtggaagaggtgcatgttcggaactgtagcttcaccgggactcaaaacgcggcaagaatc
aagacatggcagggaggatccgggtatgcaaggaagatttcctatgagcaaatcacgctt
gtagcatctaaaaatcctatcataattgatcagtattactgcgatggtgtaaataattgc
agaaactcgtcgacagcactgcaagtgagcgacgtgacatacagtggcttccaagggaca
tctgtagatgaagaagcaatcagattggactgcagtgacagaggttgtatcaacattgta
atggacaatatcaacataacctcattggatccaggaaaaactacttatgcctattgcgaa
cacactagtggaacatcttggtttactgcaccgtatgtgccctgcctatcagtatcagga
tactga

DBGET integrated database retrieval system